Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SCAPERQ9BY12 Z85995.1-201ENST00000415547 335 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 ZNF90P2-204ENST00000419323 1075 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 AP002345.1-201ENST00000456493 928 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAPERQ9BY12 MTCO2P32-201ENST00000514865 403 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 AC090897.2-201ENST00000581715 130 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.09□□□□□ -2.07
SCAPERQ9BY12 AC116563.2-201ENST00000624751 535 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 AC096656.1-201ENST00000623826 1364 ntBASIC2.09□□□□□ -2.07
SCAPERQ9BY12 MIR320A-201ENST00000385302 82 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 FABP5P3-201ENST00000437960 408 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 RPL30P11-201ENST00000495304 339 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 AC073055.1-201ENST00000456901 1621 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 BZW1P2-201ENST00000473537 826 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 AC008885.2-201ENST00000509506 930 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 AL359273.1-201ENST00000510918 627 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 RNU1-61P-201ENST00000516107 151 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 NDUFS5P6-201ENST00000529136 295 ntBASIC2.08□□□□□ -2.08
SCAPERQ9BY12 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.08□□□□□ -2.08
SCAPERQ9BY12 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SCAPERQ9BY12 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.07□□□□□ -2.08
SCAPERQ9BY12 AC244098.2-201ENST00000422068 99 ntBASIC2.07□□□□□ -2.08
SCAPERQ9BY12 COX6CP12-201ENST00000446748 202 ntBASIC2.07□□□□□ -2.08
SCAPERQ9BY12 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC2.07□□□□□ -2.08
SCAPERQ9BY12 RPS29P29-201ENST00000456396 171 ntBASIC2.07□□□□□ -2.08
SCAPERQ9BY12 AC008427.1-201ENST00000503102 655 ntBASIC2.07□□□□□ -2.08
SCAPERQ9BY12 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.07□□□□□ -2.08
SCAPERQ9BY12 AP003117.1-201ENST00000602771 554 ntBASIC2.07□□□□□ -2.08
SCAPERQ9BY12 MIR6515-201ENST00000619843 57 ntBASIC2.07□□□□□ -2.08
SCAPERQ9BY12 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 MIR520E-201ENST00000384867 87 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 SRIP3-201ENST00000413200 219 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AC093716.1-201ENST00000435923 377 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 ARL5AP2-201ENST00000444698 533 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AL139109.1-201ENST00000455491 297 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AP004607.1-201ENST00000524456 203 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 CASP1P1-201ENST00000526345 212 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 TRAV28-201ENST00000557548 323 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 SNRPGP15-201ENST00000600149 222 ntBASIC2.06□□□□□ -2.08
SCAPERQ9BY12 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.06□□□□□ -2.08
SCAPERQ9BY12 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SCAPERQ9BY12 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SCAPERQ9BY12 SNORD114-27-201ENST00000363766 70 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 MIR627-201ENST00000384979 97 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 SNORA46.1-201ENST00000391069 153 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 SNORA40.6-201ENST00000391153 128 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 RPS20P15-201ENST00000412792 311 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.05□□□□□ -2.08
SCAPERQ9BY12 RPL31P63-201ENST00000422565 375 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 ATP5J2P3-201ENST00000451550 258 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.05□□□□□ -2.08
SCAPERQ9BY12 COX6CP14-201ENST00000469580 174 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC009127.3-201ENST00000570531 403 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC090616.5-202ENST00000582111 297 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AL713998.2-201ENST00000604538 1198 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 BNIP3P4-201ENST00000604946 565 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC005296.1-201ENST00000616145 209 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC008121.3-201ENST00000618726 433 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 AC010809.3-201ENST00000621310 641 ntBASIC2.05□□□□□ -2.08
SCAPERQ9BY12 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SCAPERQ9BY12 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
SCAPERQ9BY12 AP002784.2-201ENST00000397300 549 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 RNU6-1077P-201ENST00000410506 102 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 SNRPGP13-201ENST00000442212 177 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 RPL23AP33-201ENST00000442301 452 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 GPM6BP3-201ENST00000442797 145 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 AC017099.1-201ENST00000448261 1028 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 PSPHP1-201ENST00000450062 261 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.04□□□□□ -2.08
SCAPERQ9BY12 RPS29P1-201ENST00000465274 159 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 RPL7P18-201ENST00000478965 734 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 AC114322.1-201ENST00000506771 926 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 AP005660.1-201ENST00000522972 293 ntBASIC2.04□□□□□ -2.08
SCAPERQ9BY12 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AL445183.3-201ENST00000414168 502 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AL512661.1-201ENST00000434586 1253 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.03□□□□□ -2.08
SCAPERQ9BY12 RPS3AP22-201ENST00000488297 769 ntBASIC2.03□□□□□ -2.08
SCAPERQ9BY12 AC104685.1-201ENST00000502445 371 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms