Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC026414.1-201ENST00000504046 698 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC113155.1-201ENST00000511141 769 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC010486.1-201ENST00000511793 424 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RNU4-29P-201ENST00000515943 174 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RNU6-1256P-201ENST00000516539 103 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AP002748.2-201ENST00000528671 348 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC090616.3-201ENST00000582184 217 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 BX664608.1-201ENST00000610519 487 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC093838.1-201ENST00000613014 469 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL512506.1-201ENST00000613918 449 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC034102.8-201ENST00000615146 484 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AL590099.1-201ENST00000615276 138 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC010975.3-201ENST00000618727 978 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC006927.2-201ENST00000639256 389 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 AC107982.1-201ENST00000507171 1300 ntBASIC1.79□□□□□ -2.12
UPK3BQ9BT76 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
UPK3BQ9BT76 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL359693.1-201ENST00000614959 2407 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC005539.1-201ENST00000443768 1479 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 RNU6-28P-201ENST00000362378 107 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 SNORD62.1-201ENST00000362541 86 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 RNA5SP68-201ENST00000363885 119 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 SNORA68.1-201ENST00000364537 132 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 RNU6-707P-201ENST00000364647 95 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL356057.3-201ENST00000402607 340 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MTCYBP45-201ENST00000435243 565 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL445687.1-201ENST00000439946 251 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL049734.2-201ENST00000441066 616 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC011816.1-201ENST00000441346 546 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 FGF7P5-201ENST00000441829 291 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MRPL42P6-201ENST00000486397 371 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MTCYBP17-201ENST00000503579 789 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC008628.1-201ENST00000508663 265 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MRPS36P2-201ENST00000512569 299 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC114781.4-201ENST00000513707 639 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 SNORA31.18-201ENST00000517043 134 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC087808.1-201ENST00000520501 361 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC243972.3-201ENST00000539655 198 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 RPL23AP84-201ENST00000571193 464 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC007336.1-201ENST00000576365 3828 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MIR5708-201ENST00000579723 85 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MIR5694-201ENST00000581190 76 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MIR3117-201ENST00000584034 78 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AC008759.3-201ENST00000613300 508 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 MIR6817-201ENST00000615588 66 ntBASIC1.78□□□□□ -2.12
UPK3BQ9BT76 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.78□□□□□ -2.12
UPK3BQ9BT76 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
UPK3BQ9BT76 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.78□□□□□ -2.13
UPK3BQ9BT76 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC022336.2-201ENST00000568966 2538 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC109315.1-201ENST00000584143 1347 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 RNU6-461P-201ENST00000364195 107 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 SNORA36C-201ENST00000384289 132 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 MIR27B-201ENST00000385129 97 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AL450338.1-201ENST00000407987 512 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 U3.37-201ENST00000408528 213 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 PPP1R11P2-201ENST00000423543 382 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC098614.2-201ENST00000426040 255 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC008850.1-201ENST00000427546 362 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AL513328.1-201ENST00000446460 224 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 DPPA3P1-201ENST00000448050 469 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AP1S2P1-201ENST00000457344 379 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC114981.1-201ENST00000503897 678 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AC008837.1-201ENST00000511513 412 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 RNU6-528P-201ENST00000516926 100 ntBASIC1.77□□□□□ -2.13
UPK3BQ9BT76 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
UPK3BQ9BT76 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms