Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 RPL30P6-201ENST00000475925 342 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 RPS3AP22-201ENST00000488297 769 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC006445.2-201ENST00000510061 472 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 MRPS33P3-201ENST00000513456 322 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 RNU6-1256P-201ENST00000516539 103 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 RNU6-1282P-201ENST00000516735 96 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 RNU6-1003P-201ENST00000517099 105 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 NRON-201ENST00000517270 370 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC008015.1-201ENST00000555505 465 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 HMGB1P14-201ENST00000557424 591 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 PCMTD1P2-201ENST00000565017 355 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AL158211.1-201ENST00000566763 763 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC005951.2-201ENST00000576282 495 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 MIR3609-201ENST00000582661 80 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC068790.3-201ENST00000602988 553 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AL160281.1-201ENST00000605307 311 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC007038.2-201ENST00000608095 740 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC004696.1-201ENST00000614345 607 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 MIR7844-201ENST00000616161 122 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 AC018692.3-201ENST00000623929 123 ntBASIC3.61□□□□□ -1.83
SDF4Q9BRK5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SDF4Q9BRK5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 OR1S2-201ENST00000302592 978 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 RNU1-39P-201ENST00000383897 165 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 SNORA46-201ENST00000384762 135 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 U8.14-201ENST00000390843 143 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC245054.2-201ENST00000415639 319 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 UBE2D3P1-201ENST00000436669 444 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AL671855.1-201ENST00000446875 1203 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 ELOCP23-201ENST00000452014 332 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AL139824.2-201ENST00000458731 1095 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 RNU6-420P-201ENST00000458780 107 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC006445.1-201ENST00000491925 405 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 DSTNP2-201ENST00000504533 515 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 ACTR3BP3-201ENST00000565577 979 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 MTCYBP22-201ENST00000603788 447 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC005000.2-201ENST00000605468 310 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AL355472.4-201ENST00000610233 626 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 uc_338.25-201ENST00000613756 156 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC010133.1-201ENST00000615809 842 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 AC079248.2-201ENST00000623779 326 ntBASIC3.6□□□□□ -1.83
SDF4Q9BRK5 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
SDF4Q9BRK5 GABRG2-229ENST00000641017 3628 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 MTND5P27-201ENST00000428871 1720 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC078974.1-201ENST00000411597 223 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 MRPL50P2-201ENST00000416821 482 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AL390023.1-201ENST00000428836 262 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 MTCO1P42-201ENST00000457379 726 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 SETP11-201ENST00000473027 690 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC005178.1-201ENST00000508392 440 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 TTC39CP1-201ENST00000512513 755 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AP000907.2-201ENST00000530827 353 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC091489.2-201ENST00000566263 604 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 MIR4325-201ENST00000583049 90 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AF038458.1-201ENST00000588406 262 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 TPMTP1-201ENST00000592307 737 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 SDR42E1P2-201ENST00000614861 481 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 SNORA50A-202ENST00000629536 136 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC092192.1-201ENST00000633154 1018 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 AC097655.1-201ENST00000635075 318 ntBASIC3.59□□□□□ -1.83
SDF4Q9BRK5 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.59□□□□□ -1.84
SDF4Q9BRK5 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
SDF4Q9BRK5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.59□□□□□ -1.84
SDF4Q9BRK5 AL353743.1-202ENST00000431724 1695 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms