Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC022690.1-201ENST00000526681 550 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.92□□□□□ -2.1
ABCA3Q99758 MIR5194-201ENST00000582634 120 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 AC005730.3-201ENST00000583067 366 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.92□□□□□ -2.1
ABCA3Q99758 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
ABCA3Q99758 uc_338.9-201ENST00000617424 182 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 U73479.1-201ENST00000618062 168 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 MIR6788-201ENST00000618842 66 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 AC010809.3-201ENST00000621310 641 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.92□□□□□ -2.1
ABCA3Q99758 RNU4-41P-201ENST00000364426 143 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 Z85995.1-201ENST00000415547 335 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.91□□□□□ -2.1
ABCA3Q99758 AC021146.8-201ENST00000507455 733 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.91□□□□□ -2.1
ABCA3Q99758 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
ABCA3Q99758 Y_RNA.178-201ENST00000363832 102 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 MIR144-201ENST00000384886 86 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCA3Q99758 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.91□□□□□ -2.1
ABCA3Q99758 RN7SKP277-201ENST00000516895 283 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 SUB1P1-201ENST00000524415 382 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.91□□□□□ -2.1
ABCA3Q99758 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.91□□□□□ -2.1
ABCA3Q99758 AC010928.2-201ENST00000588017 287 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 uc_338.12-201ENST00000616344 181 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 AC099654.7-201ENST00000635788 2127 ntBASIC1.91□□□□□ -2.1
ABCA3Q99758 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
ABCA3Q99758 RNU6-1080P-201ENST00000383982 107 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 RNU6-1181P-201ENST00000384191 106 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 MTCYBP45-201ENST00000435243 565 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 HMGN2P18-201ENST00000450680 270 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 AC093767.1-201ENST00000504523 156 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA3Q99758 MTCYBP41-201ENST00000528913 1123 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA3Q99758 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA3Q99758 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.9□□□□□ -2.11
ABCA3Q99758 AC008962.1-201ENST00000605729 304 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 MIR6078-201ENST00000611069 100 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 MIR6840-201ENST00000611937 71 ntBASIC1.9□□□□□ -2.11
ABCA3Q99758 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.9□□□□□ -2.11
ABCA3Q99758 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
ABCA3Q99758 ICE2P2-201ENST00000483823 2787 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 SNORA81-201ENST00000408493 178 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA3Q99758 RPS29P1-201ENST00000465274 159 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 AC004223.1-201ENST00000479840 271 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 NCOR1P1-202ENST00000486162 291 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.89□□□□□ -2.11
ABCA3Q99758 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.89□□□□□ -2.11
ABCA3Q99758 AC068944.2-201ENST00000610373 403 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.89□□□□□ -2.11
ABCA3Q99758 AC103710.2-202ENST00000641454 2853 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.89□□□□□ -2.11
ABCA3Q99758 CDC27P3-201ENST00000635418 1910 ntBASIC1.89□□□□□ -2.11
ABCA3Q99758 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ABCA3Q99758 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
ABCA3Q99758 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ABCA3Q99758 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA3Q99758 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC093716.1-201ENST00000435923 377 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 CALM1P1-201ENST00000442082 433 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA3Q99758 CDC42P4-201ENST00000510507 563 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA3Q99758 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC139103.1-201ENST00000534696 1030 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AC139769.3-201ENST00000618383 175 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA3Q99758 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA3Q99758 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
ABCA3Q99758 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA3Q99758 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA3Q99758 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA3Q99758 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AC023347.2-201ENST00000433994 462 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 CKS1BP5-201ENST00000434172 273 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA3Q99758 MTND2P8-201ENST00000450555 1025 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 HMGB1P38-201ENST00000490557 577 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AC008885.2-201ENST00000509506 930 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA3Q99758 OR5AQ1P-201ENST00000527596 927 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.88□□□□□ -2.11
ABCA3Q99758 AC002487.1-201ENST00000604565 994 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 MKKS-204ENST00000639674 192 ntBASIC1.88□□□□□ -2.11
ABCA3Q99758 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ABCA3Q99758 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ABCA3Q99758 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
ABCA3Q99758 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms