Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AP002907.1-201ENST00000606361 1430 ntBASIC1.05□□□□□ -2.24
COL12A1Q99715 MIR5694-201ENST00000581190 76 ntBASIC1.05□□□□□ -2.24
COL12A1Q99715 DUXAP11-201ENST00000603858 526 ntBASIC1.05□□□□□ -2.24
COL12A1Q99715 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.05□□□□□ -2.24
COL12A1Q99715 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.04□□□□□ -2.24
COL12A1Q99715 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.04□□□□□ -2.24
COL12A1Q99715 RPS15AP7-201ENST00000439294 405 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AC023424.2-201ENST00000493479 777 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AP004242.1-201ENST00000533701 349 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AL161713.1-201ENST00000555538 145 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AC010928.2-201ENST00000588017 287 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AL445493.3-201ENST00000619568 477 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 MIR6513-201ENST00000621188 64 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 CENPCP1-201ENST00000533085 2578 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AL354685.2-201ENST00000448218 1447 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
COL12A1Q99715 RNU6-178P-201ENST00000384631 104 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 MIR1197-201ENST00000408818 88 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AL512504.1-201ENST00000415494 778 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.04□□□□□ -2.24
COL12A1Q99715 RPL30P6-201ENST00000475925 342 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
COL12A1Q99715 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.04□□□□□ -2.24
COL12A1Q99715 AC007115.1-201ENST00000546853 234 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.04□□□□□ -2.24
COL12A1Q99715 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.04□□□□□ -2.24
COL12A1Q99715 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.04□□□□□ -2.24
COL12A1Q99715 AC011477.1-204ENST00000623416 1325 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.04□□□□□ -2.24
COL12A1Q99715 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
COL12A1Q99715 HMGN2P20-201ENST00000437531 273 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 JTBP1-201ENST00000441314 247 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.04□□□□□ -2.24
COL12A1Q99715 RNU11-2P-201ENST00000516898 142 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 SNHG22-203ENST00000617833 660 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AC006338.1-201ENST00000618453 749 ntBASIC1.04□□□□□ -2.24
COL12A1Q99715 AL118496.1-201ENST00000440201 1812 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
COL12A1Q99715 MTND4P31-201ENST00000425607 1343 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 CR848007.2-201ENST00000424918 787 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.03□□□□□ -2.24
COL12A1Q99715 PTGES3P5-201ENST00000455109 434 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 RPL23AP41-201ENST00000484754 458 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 AL356118.1-201ENST00000635272 1078 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.24
COL12A1Q99715 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.03□□□□□ -2.24
COL12A1Q99715 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
COL12A1Q99715 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.03□□□□□ -2.24
COL12A1Q99715 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.03□□□□□ -2.24
COL12A1Q99715 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.03□□□□□ -2.24
COL12A1Q99715 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.03□□□□□ -2.24
COL12A1Q99715 AC090821.2-201ENST00000523552 176 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 AC123912.5-201ENST00000605470 343 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 RPL23AP88-201ENST00000605759 454 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 RNU6-84P-201ENST00000607737 102 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 AL159169.2-201ENST00000610061 1269 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 AC021755.4-201ENST00000616620 456 ntBASIC1.03□□□□□ -2.24
COL12A1Q99715 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.02□□□□□ -2.25
COL12A1Q99715 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.02□□□□□ -2.25
COL12A1Q99715 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.02□□□□□ -2.25
COL12A1Q99715 AL590233.1-201ENST00000430017 456 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AL591212.2-201ENST00000433923 257 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 UBE2V1P13-201ENST00000436983 439 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC1.02□□□□□ -2.25
COL12A1Q99715 AC114786.4-201ENST00000508771 728 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AC093281.2-201ENST00000510153 597 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AC114797.1-201ENST00000514003 728 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AP003072.2-201ENST00000527756 676 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.02□□□□□ -2.25
COL12A1Q99715 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.02□□□□□ -2.25
COL12A1Q99715 MIR330-201ENST00000362196 94 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AC099548.1-201ENST00000421443 426 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.02□□□□□ -2.25
COL12A1Q99715 AC012181.1-201ENST00000479895 423 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.02□□□□□ -2.25
COL12A1Q99715 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.02□□□□□ -2.25
COL12A1Q99715 MIR4446-201ENST00000578505 67 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
COL12A1Q99715 TATDN1P1-201ENST00000414123 891 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 SNRPEP10-201ENST00000420249 274 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 RPL21P131-201ENST00000497298 483 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 ACTR3BP3-201ENST00000565577 979 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 BNIP3P7-201ENST00000605641 516 ntBASIC1.02□□□□□ -2.25
COL12A1Q99715 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
COL12A1Q99715 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
COL12A1Q99715 RNU6-670P-201ENST00000364312 104 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.01□□□□□ -2.25
COL12A1Q99715 MTCO2P9-201ENST00000503214 694 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.01□□□□□ -2.25
COL12A1Q99715 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.01□□□□□ -2.25
COL12A1Q99715 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
COL12A1Q99715 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.01□□□□□ -2.25
COL12A1Q99715 Z86062.1-201ENST00000406773 777 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 AC109780.2-201ENST00000413467 845 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 MTCYBP35-201ENST00000503630 1137 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 RPL37P25-201ENST00000507308 276 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 C2orf27A-204ENST00000623058 969 ntBASIC1.01□□□□□ -2.25
COL12A1Q99715 AC092832.1-201ENST00000422934 400 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms