Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.2□□□□□ -1.9
CDCA3Q99618 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AC138761.3-201ENST00000579993 334 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.2□□□□□ -1.9
CDCA3Q99618 AP000403.1-201ENST00000603349 851 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AP001330.4-201ENST00000604350 154 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDCA3Q99618 ATP1B3P1-201ENST00000605365 821 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 AL158211.4-201ENST00000606988 584 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.2□□□□□ -1.9
CDCA3Q99618 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CDCA3Q99618 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDCA3Q99618 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
CDCA3Q99618 AL359693.1-201ENST00000614959 2407 ntBASIC3.2□□□□□ -1.9
CDCA3Q99618 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.2□□□□□ -1.9
CDCA3Q99618 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 CCT4P2-201ENST00000233836 1548 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDCA3Q99618 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
CDCA3Q99618 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDCA3Q99618 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC062016.1-201ENST00000355719 319 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 SNORD116-2-201ENST00000384274 95 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 SNORD116-6-201ENST00000384711 96 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 MT-TH-201ENST00000387441 69 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AL021407.1-201ENST00000404531 386 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AL359704.1-201ENST00000411586 781 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.19□□□□□ -1.9
CDCA3Q99618 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC063976.3-201ENST00000426849 329 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 RPL21P40-201ENST00000428586 483 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 MED14P1-201ENST00000430517 648 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 MTND2P22-201ENST00000444325 1033 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AC117440.1-201ENST00000474107 571 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 RN7SL432P-201ENST00000484057 298 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.19□□□□□ -1.9
CDCA3Q99618 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AF131216.2-201ENST00000512316 564 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 SCGB1D5P-201ENST00000515134 247 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.19□□□□□ -1.9
CDCA3Q99618 TGIF1P1-201ENST00000558095 802 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC091489.2-201ENST00000566263 604 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC060771.1-201ENST00000582031 164 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 NRBF2P5-201ENST00000603087 788 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AC091965.4-201ENST00000607691 587 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.19□□□□□ -1.9
CDCA3Q99618 AC091903.1-201ENST00000624322 454 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 AC007256.1-201ENST00000392253 2765 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.19□□□□□ -1.9
CDCA3Q99618 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.18□□□□□ -1.9
CDCA3Q99618 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CDCA3Q99618 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.18□□□□□ -1.9
CDCA3Q99618 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC092125.1-201ENST00000562568 1995 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 RNU6-1078P-201ENST00000364522 103 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 U3.20-201ENST00000390909 217 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 RNU6-882P-201ENST00000391025 103 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDCA3Q99618 RPS4XP8-201ENST00000402039 771 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 RNU2-71P-201ENST00000411395 189 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 CCDC58P2-201ENST00000417131 366 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 OOSP1P1-201ENST00000423265 274 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AC019097.1-201ENST00000424783 735 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.18□□□□□ -1.9
CDCA3Q99618 GDI2P2-201ENST00000445131 608 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.18□□□□□ -1.9
CDCA3Q99618 MTCO1P42-201ENST00000457379 726 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 SETP2-201ENST00000553886 926 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 OR4H12P-201ENST00000556269 907 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
CDCA3Q99618 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CDCA3Q99618 AC010620.1-201ENST00000601088 1102 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AP001429.1-201ENST00000602568 530 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AL031775.1-201ENST00000607014 887 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AL355810.1-201ENST00000614629 552 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AC027807.2-201ENST00000616099 408 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AL360181.4-201ENST00000621752 134 ntBASIC3.18□□□□□ -1.9
CDCA3Q99618 AC091965.5-201ENST00000624785 342 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms