Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 RNU6-410P-201ENST00000517006 107 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-388P-201ENST00000517012 105 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-389P-201ENST00000517048 105 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC008694.2-201ENST00000517591 306 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AP005435.4-201ENST00000529514 284 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 HSPE1P3-201ENST00000559254 309 ntBASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP1Q96SZ6 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU1-15P-201ENST00000353977 144 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.22-201ENST00000362492 102 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.112-201ENST00000363250 102 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.149-201ENST00000363558 117 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-1188P-201ENST00000363795 107 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-379P-201ENST00000363813 104 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.378-201ENST00000365652 113 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.414-201ENST00000384011 101 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.476-201ENST00000384347 108 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU4-61P-201ENST00000411243 107 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 PDSS1P1-201ENST00000422953 1114 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC005019.1-201ENST00000436455 431 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC020550.1-201ENST00000447385 163 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC107399.1-201ENST00000451226 265 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RPS24P6-201ENST00000452670 400 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AL645939.1-201ENST00000453429 797 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL12P25-201ENST00000455592 494 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL7P43-201ENST00000478876 753 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 MTCO1P29-201ENST00000496868 288 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 MTCYBP40-201ENST00000509390 1135 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-764P-201ENST00000516396 105 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 RN7SKP219-201ENST00000516825 296 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AP003497.1-201ENST00000528472 562 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AP000889.2-201ENST00000532684 490 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AL161670.1-201ENST00000554348 137 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 GLUD1P4-201ENST00000590914 418 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AL022345.1-201ENST00000607292 135 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 MIR7702-201ENST00000621931 59 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 AC022418.1-201ENST00000624118 445 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 Z69720.2-201ENST00000624755 279 ntBASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP1Q96SZ6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-552P-201ENST00000362869 119 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 RNU6-238P-201ENST00000363313 106 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.167-201ENST00000363735 109 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 ENSAP1-201ENST00000392855 326 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 MRPL42P3-201ENST00000401492 326 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 Y_RNA.618-201ENST00000410949 107 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 RN7SKP167-201ENST00000411047 285 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL37P10-201ENST00000412884 288 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 RPS23P10-201ENST00000416185 486 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 MCFD2P1-201ENST00000417812 300 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 RPL30P3-201ENST00000424262 333 ntBASIC4.38□□□□□ -1.71
CDK5RAP1Q96SZ6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms