Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 DDX10P1-201ENST00000448545 1933 ntBASIC2.22□□□□□ -2.05
IFT140Q96RY7 MIR320A-201ENST00000385302 82 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 AC093716.1-201ENST00000435923 377 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 AC005297.2-201ENST00000450430 606 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.21□□□□□ -2.06
IFT140Q96RY7 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.21□□□□□ -2.06
IFT140Q96RY7 AC096571.1-202ENST00000506634 735 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 Y_RNA.675-201ENST00000516389 149 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.21□□□□□ -2.06
IFT140Q96RY7 AC097504.2-201ENST00000608088 454 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 AL158801.5-201ENST00000623123 465 ntBASIC2.21□□□□□ -2.06
IFT140Q96RY7 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.21□□□□□ -2.06
IFT140Q96RY7 CD24P4-201ENST00000382840 243 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 MIR607-201ENST00000385241 96 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 RPL26P37-201ENST00000411983 438 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 AL121871.1-201ENST00000443413 436 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 MRPL42P6-201ENST00000486397 371 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC093281.2-201ENST00000510153 597 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 HMGB3P3-201ENST00000510526 400 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC139769.3-201ENST00000618383 175 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC011477.1-204ENST00000623416 1325 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC079597.1-201ENST00000624306 508 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC090740.1-201ENST00000623193 2262 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 UBE2V1P13-201ENST00000436983 439 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 SNRPGP13-201ENST00000442212 177 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 MTCO1P48-201ENST00000448024 1096 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 AP002371.1-201ENST00000463604 433 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 NCOR1P1-202ENST00000486162 291 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC105036.1-201ENST00000566222 271 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AL161734.1-201ENST00000609720 557 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 AC116563.2-201ENST00000624751 535 ntBASIC2.2□□□□□ -2.06
IFT140Q96RY7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
IFT140Q96RY7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
IFT140Q96RY7 RNU6-600P-201ENST00000362524 99 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 AL445183.3-201ENST00000414168 502 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 Z75741.2-201ENST00000417272 1167 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.19□□□□□ -2.06
IFT140Q96RY7 OR5AQ1P-201ENST00000527596 927 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 AC025423.2-201ENST00000537570 439 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.19□□□□□ -2.06
IFT140Q96RY7 AP003117.1-201ENST00000602771 554 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 AL355816.1-201ENST00000607951 118 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
IFT140Q96RY7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
IFT140Q96RY7 ZNF33CP-201ENST00000432492 2030 ntBASIC2.18□□□□□ -2.06
IFT140Q96RY7 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 ERHP2-201ENST00000402323 299 ntBASIC2.18□□□□□ -2.06
IFT140Q96RY7 AL023807.1-201ENST00000407932 359 ntBASIC2.18□□□□□ -2.06
IFT140Q96RY7 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 RNU4-60P-201ENST00000517239 135 ntBASIC2.18□□□□□ -2.06
IFT140Q96RY7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 AC245036.5-201ENST00000596330 847 ntBASIC2.18□□□□□ -2.06
IFT140Q96RY7 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 AC135776.4-201ENST00000624300 1904 ntBASIC2.18□□□□□ -2.06
IFT140Q96RY7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
IFT140Q96RY7 RNF6P1-201ENST00000444889 1784 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
IFT140Q96RY7 AL033519.2-201ENST00000403958 392 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 U3.40-201ENST00000408706 208 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.17□□□□□ -2.06
IFT140Q96RY7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.17□□□□□ -2.06
IFT140Q96RY7 AC090774.1-201ENST00000435925 246 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 AL078601.1-201ENST00000444542 271 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 RPL37P6-202ENST00000464216 403 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 SUMO2P6-201ENST00000505273 288 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC2.17□□□□□ -2.06
IFT140Q96RY7 AC087373.1-201ENST00000524920 491 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 AP003033.1-201ENST00000527244 415 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 DUXAP5-201ENST00000529668 529 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.17□□□□□ -2.06
IFT140Q96RY7 AC007275.1-201ENST00000621243 671 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 MKKS-204ENST00000639674 192 ntBASIC2.17□□□□□ -2.06
IFT140Q96RY7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
IFT140Q96RY7 RNU4-41P-201ENST00000364426 143 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 SNORA51.2-201ENST00000364595 132 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 Y_RNA.295-201ENST00000364918 102 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.16□□□□□ -2.06
IFT140Q96RY7 SNORA81-201ENST00000408493 178 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 AL030996.1-201ENST00000411430 235 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 AL512661.1-201ENST00000434586 1253 ntBASIC2.16□□□□□ -2.06
IFT140Q96RY7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.16□□□□□ -2.06
IFT140Q96RY7 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms