Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 AC105313.1-201ENST00000509121 353 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 RNU6-405P-201ENST00000516637 110 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 RNA5SP82-201ENST00000516707 92 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 RNU6-467P-201ENST00000517027 110 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 MIR4512-201ENST00000583257 77 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 BNIP3P4-201ENST00000604946 565 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 RNU6-461P-201ENST00000364195 107 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 CASP3P1-201ENST00000446037 609 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 MIR4446-201ENST00000578505 67 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 AC090425.2-201ENST00000608818 501 ntBASIC1.22□□□□□ -2.21
PCNX1Q96RV3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
PCNX1Q96RV3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 RPL23AP47-201ENST00000408017 460 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 PRELID3BP11-201ENST00000414230 479 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 CST2P1-201ENST00000425770 87 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 CKS1BP5-201ENST00000434172 273 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 Z85994.2-201ENST00000434327 452 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AL031659.1-201ENST00000447075 539 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 CLIC4P1-201ENST00000453177 535 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AC022447.3-201ENST00000506865 495 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AC006499.2-201ENST00000513470 337 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AC084364.2-201ENST00000546924 395 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 NOP56P3-201ENST00000549457 385 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 MTND4LP5-201ENST00000605152 292 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AL136520.1-201ENST00000600311 1322 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 MIR144-201ENST00000384886 86 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 BX682237.1-201ENST00000415016 335 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 RPL35AP22-201ENST00000436855 335 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AL353718.1-201ENST00000451028 517 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.21□□□□□ -2.22
PCNX1Q96RV3 MIR5694-201ENST00000581190 76 ntBASIC1.21□□□□□ -2.22
PCNX1Q96RV3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AP002907.1-201ENST00000606361 1430 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AL356057.2-201ENST00000403318 432 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC018630.2-202ENST00000422992 927 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 RPS29P29-201ENST00000456396 171 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 snoU13.3-201ENST00000459441 104 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC104229.1-201ENST00000561364 255 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC005034.5-201ENST00000604219 466 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC112191.3-201ENST00000604371 277 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 ANAPC10P1-201ENST00000395991 556 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 RFESDP1-201ENST00000422350 461 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 RPS6P14-201ENST00000425165 719 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 TRAPPC2P5-201ENST00000426293 308 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 RPL21P131-201ENST00000497298 483 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 RPL37P25-201ENST00000507308 276 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 SMARCE1P4-201ENST00000523647 241 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 IMMP1LP2-201ENST00000552954 492 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.2□□□□□ -2.22
PCNX1Q96RV3 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC091057.2-201ENST00000602594 792 ntBASIC1.2□□□□□ -2.22
PCNX1Q96RV3 AC135776.4-201ENST00000624300 1904 ntBASIC1.19□□□□□ -2.22
PCNX1Q96RV3 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
PCNX1Q96RV3 RNA5SP393-201ENST00000363423 117 ntBASIC1.19□□□□□ -2.22
PCNX1Q96RV3 RNU2-25P-201ENST00000411041 191 ntBASIC1.19□□□□□ -2.22
PCNX1Q96RV3 AL591212.2-201ENST00000433923 257 ntBASIC1.19□□□□□ -2.22
PCNX1Q96RV3 AL356118.1-201ENST00000635272 1078 ntBASIC1.19□□□□□ -2.22
PCNX1Q96RV3 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 RNU6-105P-201ENST00000363909 104 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC092447.6-201ENST00000414578 210 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC093084.1-201ENST00000424233 687 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 RPS15AP7-201ENST00000439294 405 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC005912.1-201ENST00000495392 255 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AC025755.1-201ENST00000521306 278 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL589935.2-201ENST00000616471 1231 ntBASIC1.18□□□□□ -2.22
PCNX1Q96RV3 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
PCNX1Q96RV3 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms