Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.44□□□□□ -1.86
NR1H4Q96RI1 MIR3913-1-201ENST00000577744 102 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 MIR4277-201ENST00000578298 84 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 MIR4474-201ENST00000579189 78 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AC079089.3-201ENST00000603094 673 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 DPPA3P3-201ENST00000603842 430 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AL356218.2-201ENST00000605264 187 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AC104073.3-201ENST00000610942 955 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AL589743.7-201ENST00000612637 233 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 HULC.1-201ENST00000612720 240 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AL589994.2-201ENST00000621124 579 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 OR5BE1P-202ENST00000641168 1176 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 OR5H6-203ENST00000642105 978 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 AL137003.2-201ENST00000606924 2538 ntBASIC3.44□□□□□ -1.86
NR1H4Q96RI1 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NR1H4Q96RI1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
NR1H4Q96RI1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NR1H4Q96RI1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 FAM35CP-201ENST00000554755 2470 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 MIR383-201ENST00000362257 73 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 Y_RNA.318-201ENST00000365131 97 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RNU5E-6P-201ENST00000365574 115 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 OR5H15-201ENST00000383696 930 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RNU6-701P-201ENST00000384059 107 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 ELOCP19-201ENST00000411919 318 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC068533.1-201ENST00000418542 415 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 BTF3L4P3-201ENST00000418879 476 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 PIGFP2-201ENST00000421400 651 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 USP9YP36-201ENST00000424581 829 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 MTCO3P5-201ENST00000433620 714 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 NEFMP1-201ENST00000443423 1006 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 MTATP6P30-201ENST00000443540 664 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RNU6-420P-201ENST00000458780 107 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RPL21P11-201ENST00000461458 483 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RPL32P34-201ENST00000486380 400 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RN7SL283P-201ENST00000489055 303 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RNA5SP385-201ENST00000515947 110 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RNU6-352P-201ENST00000516908 107 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC245166.1-201ENST00000521012 253 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC022616.3-201ENST00000523940 148 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RPS3AP4-201ENST00000555161 764 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AL391840.1-201ENST00000571144 367 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC087683.1-201ENST00000591187 441 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC019176.2-201ENST00000611579 315 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC005332.10-201ENST00000612725 619 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 MTND5P7-201ENST00000413558 1798 ntBASIC3.43□□□□□ -1.86
NR1H4Q96RI1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NR1H4Q96RI1 AL049641.1-201ENST00000441055 1948 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 RNA5SP366-201ENST00000365454 123 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 MIR325-201ENST00000385260 98 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 HSPE1P12-201ENST00000412576 301 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 RPL26P29-201ENST00000415623 438 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 ZNF90P2-204ENST00000419323 1075 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC091390.3-201ENST00000426478 338 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 OR2AS1P-201ENST00000427827 319 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 Z82210.1-201ENST00000440037 231 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.42□□□□□ -1.86
NR1H4Q96RI1 RPS29P22-201ENST00000472363 168 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC023598.1-201ENST00000472521 361 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC093663.1-201ENST00000497190 394 ntBASIC3.42□□□□□ -1.86
NR1H4Q96RI1 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms