Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC090821.2-201ENST00000523552 176 ntBASIC1.2□□□□□ -2.22
CFAP54Q96N23 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.2□□□□□ -2.22
CFAP54Q96N23 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
CFAP54Q96N23 RNA5SP393-201ENST00000363423 117 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 TATDN1P1-201ENST00000414123 891 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC008427.1-201ENST00000503102 655 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 LRRC34P2-201ENST00000514850 553 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC1.19□□□□□ -2.22
CFAP54Q96N23 VN1R107P-201ENST00000601784 209 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC011477.1-204ENST00000623416 1325 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 CUL4AP1-201ENST00000514750 1863 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.19□□□□□ -2.22
CFAP54Q96N23 AP003072.2-201ENST00000527756 676 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.19□□□□□ -2.22
CFAP54Q96N23 MIR4446-201ENST00000578505 67 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 GAS5-AS1-201ENST00000602767 694 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 RPL23AP88-201ENST00000605759 454 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC123912.3-201ENST00000600907 1367 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC090740.1-201ENST00000623193 2262 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CFAP54Q96N23 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.19□□□□□ -2.22
CFAP54Q96N23 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CFAP54Q96N23 RNA5SP309-201ENST00000516670 106 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC005498.1-201ENST00000592125 465 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 AC017076.1-201ENST00000607613 578 ntBASIC1.19□□□□□ -2.22
CFAP54Q96N23 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
CFAP54Q96N23 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.18□□□□□ -2.22
CFAP54Q96N23 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.18□□□□□ -2.22
CFAP54Q96N23 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.18□□□□□ -2.22
CFAP54Q96N23 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CFAP54Q96N23 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CFAP54Q96N23 AL136164.4-201ENST00000625013 2135 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 DEFB108F-201ENST00000344638 222 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 RNA5SP331-201ENST00000364986 107 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 SUMO1P4-201ENST00000429430 302 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 OR51B8P-201ENST00000449892 769 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 AC118942.1-201ENST00000529674 1035 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 AC009127.3-201ENST00000570531 403 ntBASIC1.18□□□□□ -2.22
CFAP54Q96N23 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CFAP54Q96N23 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CFAP54Q96N23 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AP000926.1-201ENST00000479573 241 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 DUXAP3-201ENST00000603616 594 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC073413.2-201ENST00000604332 360 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AL135786.2-201ENST00000608422 615 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AP002967.1-201ENST00000624203 539 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 MTND4P12-201ENST00000498999 1377 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AP002907.1-201ENST00000606361 1430 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC099548.1-201ENST00000421443 426 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC023424.2-201ENST00000493479 777 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 RPL21P131-201ENST00000497298 483 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC021755.4-201ENST00000616620 456 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AL590233.1-201ENST00000430017 456 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC006270.2-201ENST00000578523 652 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 BNIP3P7-201ENST00000605641 516 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AL159169.2-201ENST00000610061 1269 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 AC006338.1-201ENST00000618453 749 ntBASIC1.17□□□□□ -2.22
CFAP54Q96N23 PSMA2P3-201ENST00000429685 675 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.16□□□□□ -2.22
CFAP54Q96N23 RPS26P21-201ENST00000475397 348 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.16□□□□□ -2.22
CFAP54Q96N23 AC016877.3-201ENST00000606778 504 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.16□□□□□ -2.22
CFAP54Q96N23 CR848007.2-201ENST00000424918 787 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 AC008850.1-201ENST00000427546 362 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.16□□□□□ -2.22
CFAP54Q96N23 OR5AQ1P-201ENST00000527596 927 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 AC091925.1-201ENST00000623204 462 ntBASIC1.16□□□□□ -2.22
CFAP54Q96N23 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CFAP54Q96N23 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.15□□□□□ -2.22
CFAP54Q96N23 Z86062.1-201ENST00000406773 777 ntBASIC1.15□□□□□ -2.22
CFAP54Q96N23 AC087343.1-201ENST00000477341 475 ntBASIC1.15□□□□□ -2.22
CFAP54Q96N23 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.15□□□□□ -2.22
CFAP54Q96N23 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.15□□□□□ -2.22
CFAP54Q96N23 AC007115.1-201ENST00000546853 234 ntBASIC1.15□□□□□ -2.22
CFAP54Q96N23 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.15□□□□□ -2.22
CFAP54Q96N23 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.15□□□□□ -2.23
CFAP54Q96N23 FCF1P2-201ENST00000415284 583 ntBASIC1.15□□□□□ -2.23
CFAP54Q96N23 SNRPEP10-201ENST00000420249 274 ntBASIC1.15□□□□□ -2.23
CFAP54Q96N23 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.15□□□□□ -2.23
CFAP54Q96N23 AC123912.5-201ENST00000605470 343 ntBASIC1.15□□□□□ -2.23
CFAP54Q96N23 AC116618.1-201ENST00000634617 774 ntBASIC1.15□□□□□ -2.23
CFAP54Q96N23 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
CFAP54Q96N23 AC130650.2-201ENST00000618736 2403 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC1.14□□□□□ -2.23
CFAP54Q96N23 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.14□□□□□ -2.23
CFAP54Q96N23 MIR5694-201ENST00000581190 76 ntBASIC1.14□□□□□ -2.23
CFAP54Q96N23 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
CFAP54Q96N23 AL118496.1-201ENST00000440201 1812 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms