Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC006023.2-201ENST00000609916 167 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC093838.1-201ENST00000613014 469 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC004696.1-201ENST00000614345 607 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL450472.3-201ENST00000615578 367 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL353748.2-201ENST00000622148 471 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AL161637.1-201ENST00000622380 412 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC243312.2-201ENST00000623340 601 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
VPS50Q96JG6 AC116667.1-201ENST00000604855 2072 ntBASIC3.88□□□□□ -1.79
VPS50Q96JG6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
VPS50Q96JG6 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL161912.2-201ENST00000565707 3007 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 RNU6-1120P-201ENST00000362988 108 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 U3.11-201ENST00000364476 212 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 RNU6-1158P-201ENST00000391167 107 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL583835.1-201ENST00000399570 407 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL591416.1-201ENST00000404015 867 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 MTCO3P12-201ENST00000416718 547 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 CCDC58P2-201ENST00000417131 366 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 TOMM22P1-201ENST00000418578 312 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 SDCBPP3-201ENST00000419629 891 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL109913.1-201ENST00000421173 514 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 HMGB3P12-201ENST00000438745 556 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL359073.1-201ENST00000448036 403 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 RPL23AP14-201ENST00000468281 468 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 RPS4XP13-201ENST00000483219 789 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 RN7SL271P-201ENST00000487601 295 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 NRON-201ENST00000517270 370 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC103783.1-201ENST00000520506 373 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC123904.3-201ENST00000547218 814 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL512310.1-201ENST00000548639 172 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL359212.1-201ENST00000556608 614 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 MIR5047-201ENST00000579212 100 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 RN7SL600P-201ENST00000581811 299 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC105224.1-201ENST00000587055 421 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AL606490.9-201ENST00000603331 271 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 MIR6867-201ENST00000610636 67 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC092628.2-201ENST00000622492 339 ntBASIC3.87□□□□□ -1.79
VPS50Q96JG6 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.87□□□□□ -1.79
VPS50Q96JG6 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
VPS50Q96JG6 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 RNU6-1097P-201ENST00000363586 107 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 RNA5SP130-201ENST00000364431 114 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 RN7SKP202-201ENST00000410439 330 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 RN7SKP27-201ENST00000410684 333 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 RPL30P16-201ENST00000419341 429 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 GTF2IP20-201ENST00000431663 360 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 HMGB1P12-201ENST00000438594 598 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC016696.1-201ENST00000446949 318 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 VN1R34P-201ENST00000447387 883 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 RPS11P1-201ENST00000451072 473 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC026402.1-201ENST00000513642 170 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 RNU6-410P-201ENST00000517006 107 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.86□□□□□ -1.79
VPS50Q96JG6 HMGB1P41-201ENST00000520234 440 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 FAM60DP-201ENST00000524174 632 ntBASIC3.86□□□□□ -1.79
VPS50Q96JG6 AC008489.1-201ENST00000524271 483 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms