Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AC012170.1-201ENST00000495139 359 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC110792.2-201ENST00000510278 224 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 MTCO1P30-201ENST00000515244 580 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 RNA5SP402-201ENST00000517148 110 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 VN1R84P-201ENST00000593697 235 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 DUXAP11-201ENST00000603858 526 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TTC28Q96AY4 AL445493.3-201ENST00000619568 477 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 AC145207.9-201ENST00000623802 325 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 MIR4278-201ENST00000636094 69 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.3□□□□□ -2.2
TTC28Q96AY4 AL137003.2-201ENST00000606924 2538 ntBASIC1.3□□□□□ -2.2
TTC28Q96AY4 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AL512283.1-201ENST00000606756 1384 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 MIR92A2-201ENST00000385299 75 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 PRELID3BP11-201ENST00000414230 479 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 TRAV31-201ENST00000502780 342 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 MTND5P7-201ENST00000413558 1798 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 MTND4P31-201ENST00000425607 1343 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AC090774.1-201ENST00000435925 246 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 OR10R1P-201ENST00000441524 1141 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 RPL39P40-201ENST00000445481 146 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 LARP7P4-201ENST00000481075 878 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 RPS27AP10-201ENST00000496103 208 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TTC28Q96AY4 RNA5SP309-201ENST00000516670 106 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 AC104986.1-201ENST00000517978 436 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 AC105036.1-201ENST00000566222 271 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 MIR4448-201ENST00000584360 86 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 GLUD1P4-201ENST00000590914 418 ntBASIC1.29□□□□□ -2.2
TTC28Q96AY4 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
TTC28Q96AY4 ICE2P2-201ENST00000483823 2787 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 UBE2V1P13-201ENST00000436983 439 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 AC004022.1-201ENST00000447766 1066 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 AC023790.1-201ENST00000482174 347 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 OR5H4P-201ENST00000510851 923 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 MTND5P9-201ENST00000503854 1755 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 AL596276.1-201ENST00000434465 418 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 PSPHP1-201ENST00000450062 261 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
TTC28Q96AY4 BNIP3P7-201ENST00000605641 516 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 AC007742.2-201ENST00000618226 398 ntBASIC1.28□□□□□ -2.2
TTC28Q96AY4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TTC28Q96AY4 SNORD48-201ENST00000364953 64 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 ARF4P2-201ENST00000430209 526 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 AC010683.1-201ENST00000473673 378 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 VN1R81P-201ENST00000602085 372 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 AL355816.1-201ENST00000607951 118 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TTC28Q96AY4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
TTC28Q96AY4 AC018630.2-201ENST00000534866 2403 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 AC130650.2-201ENST00000618736 2403 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
TTC28Q96AY4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 RNA5SP295-201ENST00000362655 121 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 RNU2-25P-201ENST00000411041 191 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 AL353898.1-201ENST00000444055 238 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 MIR4295-201ENST00000585286 85 ntBASIC1.27□□□□□ -2.21
TTC28Q96AY4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC1.27□□□□□ -2.21
TTC28Q96AY4 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TTC28Q96AY4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms