Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC130324.3-201ENST00000614165 542 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AC009248.2-201ENST00000619826 254 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 C2orf27A-204ENST00000623058 969 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 AL136313.1-201ENST00000624804 202 ntBASIC4.57□□□□□ -1.68
ERCC4Q92889 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC4Q92889 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
ERCC4Q92889 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC4Q92889 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
ERCC4Q92889 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC4Q92889 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
ERCC4Q92889 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ERCC4Q92889 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
ERCC4Q92889 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
ERCC4Q92889 HSPA8P1-201ENST00000425843 1833 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 ASNSP3-201ENST00000451989 1306 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.56□□□□□ -1.68
ERCC4Q92889 RNA5SP509-201ENST00000364577 119 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 SNORA51.2-201ENST00000364595 132 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 Y_RNA.493-201ENST00000384422 102 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 CKS1BP5-201ENST00000434172 273 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 RPL35AP22-201ENST00000436855 335 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC4Q92889 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.56□□□□□ -1.68
ERCC4Q92889 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC4Q92889 RPL36AP13-201ENST00000457490 317 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC069499.1-201ENST00000489433 509 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC4Q92889 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.56□□□□□ -1.68
ERCC4Q92889 AC116562.3-201ENST00000506136 177 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC112206.3-201ENST00000514578 389 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 HMGB1P41-201ENST00000520234 440 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC068587.5-201ENST00000528506 175 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AP003385.6-201ENST00000531603 374 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.56□□□□□ -1.68
ERCC4Q92889 CR383656.7-201ENST00000548164 174 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC4Q92889 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.56□□□□□ -1.68
ERCC4Q92889 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.56□□□□□ -1.68
ERCC4Q92889 AC037471.2-201ENST00000564941 598 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC4Q92889 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.56□□□□□ -1.68
ERCC4Q92889 MIR7151-201ENST00000617477 60 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 AC006065.5-201ENST00000623427 349 ntBASIC4.56□□□□□ -1.68
ERCC4Q92889 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC4Q92889 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.56□□□□□ -1.68
ERCC4Q92889 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC4Q92889 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC4Q92889 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
ERCC4Q92889 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
ERCC4Q92889 AC026951.1-201ENST00000559530 2459 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU4-79P-201ENST00000362764 141 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 Y_RNA.231-201ENST00000364358 102 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU5E-6P-201ENST00000365574 115 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU4-20P-201ENST00000365601 151 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU6-116P-201ENST00000384042 109 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU2-39P-201ENST00000410604 198 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU6-516P-201ENST00000411381 104 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.55□□□□□ -1.68
ERCC4Q92889 AC011933.1-201ENST00000413334 321 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC092447.6-201ENST00000414578 210 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AL645937.1-202ENST00000421799 937 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 MRPS18BP2-201ENST00000434310 759 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RPL36AP6-201ENST00000435770 321 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 USP9YP7-201ENST00000436723 430 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AL590399.6-201ENST00000446396 307 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RPL7P12-201ENST00000446719 750 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 MTND3P16-201ENST00000452205 344 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 USP9YP32-201ENST00000452432 430 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU7-182P-201ENST00000459009 62 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 SNORD108-201ENST00000459332 71 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 snoU13.3-201ENST00000459441 104 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC116533.1-201ENST00000459748 321 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.55□□□□□ -1.68
ERCC4Q92889 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC4Q92889 RN7SKP116-201ENST00000516902 319 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC105029.1-201ENST00000520250 669 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC107953.1-201ENST00000522216 297 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.55□□□□□ -1.68
ERCC4Q92889 AC087241.2-201ENST00000535801 324 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.55□□□□□ -1.68
ERCC4Q92889 BNIP3P6-201ENST00000549284 499 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 GNRHR2P1-201ENST00000555315 631 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.55□□□□□ -1.68
ERCC4Q92889 MIR4424-201ENST00000585257 86 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 RNU6-89P-201ENST00000606519 100 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC023043.4-201ENST00000612081 449 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AL442067.2-201ENST00000614033 363 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC114781.5-201ENST00000615297 108 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 MIR6758-201ENST00000620653 63 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 AC005858.4-201ENST00000623191 700 ntBASIC4.55□□□□□ -1.68
ERCC4Q92889 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC4Q92889 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ERCC4Q92889 AP001486.2-201ENST00000561652 5113 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 FRG1CP-201ENST00000358464 769 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RPL32P3-201ENST00000359025 275 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 SNORD6-201ENST00000365444 73 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNU11-4P-201ENST00000391149 133 ntBASIC4.54□□□□□ -1.68
ERCC4Q92889 RNU6-903P-201ENST00000391270 109 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms