Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
AP3S1Q92572 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
AP3S1Q92572 AC008555.8-201ENST00000623602 2168 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 RNU2-47P-201ENST00000410649 186 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.77□□□□□ -2.13
AP3S1Q92572 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.77□□□□□ -2.13
AP3S1Q92572 AIMP1P2-201ENST00000425294 312 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 RPL31P54-201ENST00000429803 370 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AC000041.1-201ENST00000439655 175 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 PIGFP3-201ENST00000441918 722 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AL500527.1-201ENST00000448532 255 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 MTCO1P42-201ENST00000457379 726 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.77□□□□□ -2.13
AP3S1Q92572 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC1.77□□□□□ -2.13
AP3S1Q92572 HMGB3P17-201ENST00000504195 649 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.77□□□□□ -2.13
AP3S1Q92572 SCARNA15.2-201ENST00000516409 127 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.77□□□□□ -2.13
AP3S1Q92572 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.77□□□□□ -2.13
AP3S1Q92572 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.77□□□□□ -2.13
AP3S1Q92572 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.77□□□□□ -2.13
AP3S1Q92572 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.77□□□□□ -2.13
AP3S1Q92572 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.77□□□□□ -2.13
AP3S1Q92572 MIR4444-1-201ENST00000581696 74 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.77□□□□□ -2.13
AP3S1Q92572 MIR4444-2-201ENST00000584390 74 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.77□□□□□ -2.13
AP3S1Q92572 VN1R90P-201ENST00000595717 726 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AC245100.7-201ENST00000609678 442 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 AL137790.1-201ENST00000634283 177 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
AP3S1Q92572 AC009487.4-201ENST00000624969 3585 ntBASIC1.77□□□□□ -2.13
AP3S1Q92572 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
AP3S1Q92572 SNORA71.3-201ENST00000362582 128 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 RNU6-217P-201ENST00000384164 104 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 U8.14-201ENST00000390843 143 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 RNU6-750P-201ENST00000390946 107 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AL450338.1-201ENST00000407987 512 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 RNU2-49P-201ENST00000410666 184 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 OR51A3P-201ENST00000413596 924 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3S1Q92572 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC092047.1-201ENST00000424997 240 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AL121578.1-201ENST00000428051 892 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 SDCBPP1-201ENST00000440192 890 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.76□□□□□ -2.13
AP3S1Q92572 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.76□□□□□ -2.13
AP3S1Q92572 AC104978.1-201ENST00000449387 391 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3S1Q92572 AP1S2P1-201ENST00000457344 379 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC080013.2-201ENST00000460866 323 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 RPL23AP42-201ENST00000471152 471 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 RPL7P49-201ENST00000471402 708 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 HSPE1P6-201ENST00000479457 291 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3S1Q92572 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3S1Q92572 AC093281.2-201ENST00000510153 597 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3S1Q92572 RNU6-1256P-201ENST00000516539 103 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 HMGB1P1-201ENST00000522557 636 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.76□□□□□ -2.13
AP3S1Q92572 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
AP3S1Q92572 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.76□□□□□ -2.13
AP3S1Q92572 AC024614.2-201ENST00000577584 372 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 BPTFP1-201ENST00000579209 492 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 MIR3944-201ENST00000581277 108 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC004908.2-201ENST00000609090 574 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 TUG1_1.1-201ENST00000610654 145 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC005296.1-201ENST00000616145 209 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 AC109809.1-201ENST00000619665 545 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 MTCO1P23-201ENST00000415223 1526 ntBASIC1.76□□□□□ -2.13
AP3S1Q92572 HMGB1P17-201ENST00000403495 628 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 RPS3AP25-201ENST00000411660 793 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC003685.2-201ENST00000422795 395 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 MTCYBP45-201ENST00000435243 565 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 Z82210.1-201ENST00000440037 231 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 BNIP3P2-201ENST00000441221 577 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.75□□□□□ -2.13
AP3S1Q92572 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AC044797.1-201ENST00000445744 679 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.75□□□□□ -2.13
AP3S1Q92572 RPL21P134-201ENST00000453468 483 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC011825.1-201ENST00000484967 388 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC107032.1-201ENST00000485945 480 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 RNU6-416P-201ENST00000516265 103 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AC095057.3-201ENST00000567102 1157 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.75□□□□□ -2.13
AP3S1Q92572 AL020997.3-201ENST00000602843 359 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC008121.1-201ENST00000603244 268 ntBASIC1.75□□□□□ -2.13
AP3S1Q92572 AC005034.5-201ENST00000604219 466 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms