Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 AC027287.1-201ENST00000553115 1453 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 MIR208A-201ENST00000362287 71 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 RNU6-761P-201ENST00000384148 107 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 MIR19A-201ENST00000384878 82 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 MT-TC-201ENST00000387405 66 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 RNU2-62P-201ENST00000410868 191 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 RNU2-41P-201ENST00000410991 178 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 MRPL50P2-201ENST00000416821 482 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 FTH1P1-201ENST00000437933 532 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.71□□□□□ -1.66
RTF1Q92541 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.71□□□□□ -1.66
RTF1Q92541 FDX1P2-201ENST00000450769 375 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC108059.3-201ENST00000456388 214 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.71□□□□□ -1.66
RTF1Q92541 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTF1Q92541 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 AC021146.1-201ENST00000511202 716 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 AC046134.1-201ENST00000514454 666 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.71□□□□□ -1.66
RTF1Q92541 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.71□□□□□ -1.66
RTF1Q92541 AF235103.2-201ENST00000525753 346 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC107016.1-201ENST00000550463 337 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 CBX3P5-201ENST00000552017 521 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.71□□□□□ -1.66
RTF1Q92541 OR4T1P-201ENST00000554933 911 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.71□□□□□ -1.66
RTF1Q92541 COX6CP3-201ENST00000580869 223 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.71□□□□□ -1.66
RTF1Q92541 AL136363.1-201ENST00000605349 337 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 AC006329.2-201ENST00000611491 394 ntBASIC4.71□□□□□ -1.66
RTF1Q92541 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTF1Q92541 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.71□□□□□ -1.66
RTF1Q92541 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTF1Q92541 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTF1Q92541 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTF1Q92541 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTF1Q92541 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.7□□□□□ -1.66
RTF1Q92541 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTF1Q92541 CBX3P1-201ENST00000325243 554 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 SNORA70.4-201ENST00000365509 134 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RTF1Q92541 HSPE1P8-201ENST00000406997 288 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 MTHFD2P2-201ENST00000407725 247 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 HMGN1P24-201ENST00000412282 298 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 RAC1P3-201ENST00000416129 580 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 BX842559.1-201ENST00000419615 532 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AF228730.2-201ENST00000438784 848 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 SEPT14P3-201ENST00000439401 183 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.7□□□□□ -1.66
RTF1Q92541 RAC1P7-201ENST00000445367 377 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AL732372.2-207ENST00000445840 183 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.7□□□□□ -1.66
RTF1Q92541 SEPT14P2-201ENST00000453405 183 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.7□□□□□ -1.66
RTF1Q92541 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.7□□□□□ -1.66
RTF1Q92541 RNU6-261P-201ENST00000459506 102 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.7□□□□□ -1.66
RTF1Q92541 AP000852.1-201ENST00000472460 573 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.7□□□□□ -1.66
RTF1Q92541 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.7□□□□□ -1.66
RTF1Q92541 SEPT14P4-201ENST00000513445 186 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 RNU6-410P-201ENST00000517006 107 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.7□□□□□ -1.66
RTF1Q92541 FO082796.1-201ENST00000523795 183 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.7□□□□□ -1.66
RTF1Q92541 OR4P1P-201ENST00000530808 1136 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC007424.1-203ENST00000554613 687 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AL161713.1-201ENST00000555538 145 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 HMGB1P6-201ENST00000569046 646 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.7□□□□□ -1.66
RTF1Q92541 MIR4719-201ENST00000585233 84 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
RTF1Q92541 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.7□□□□□ -1.66
RTF1Q92541 BNIP3P9-201ENST00000603714 553 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC025449.1-201ENST00000603896 529 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 AC006077.1-201ENST00000604746 343 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.7□□□□□ -1.66
RTF1Q92541 AC245517.5-201ENST00000611529 162 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.7□□□□□ -1.66
RTF1Q92541 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RTF1Q92541 AC112204.3-201ENST00000623822 332 ntBASIC4.7□□□□□ -1.66
RTF1Q92541 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.7□□□□□ -1.66
RTF1Q92541 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTF1Q92541 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTF1Q92541 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTF1Q92541 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTF1Q92541 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTF1Q92541 CKAP2P1-201ENST00000555477 2049 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 RNA5SP50-201ENST00000363731 107 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 RNY3P3-201ENST00000363816 102 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTF1Q92541 RNA5SP118-201ENST00000410385 109 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 RN7SKP177-201ENST00000410567 355 ntBASIC4.69□□□□□ -1.66
RTF1Q92541 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.69□□□□□ -1.66
RTF1Q92541 RPL21P111-201ENST00000418453 477 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms