Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 GMFBP1-201ENST00000467831 427 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RPS15AP36-201ENST00000492022 382 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 NIPA2P2-201ENST00000496376 1083 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AC116562.3-201ENST00000506136 177 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AC105417.1-201ENST00000514691 285 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RN7SKP83-201ENST00000516512 178 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AC022695.1-201ENST00000522089 237 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AC068587.5-201ENST00000528506 175 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 MIR6758-201ENST00000620653 63 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 RIOK3P1-201ENST00000418778 1528 ntBASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
ATG4AQ8WYN0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 DDX10P1-201ENST00000448545 1933 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RNU6-694P-201ENST00000364071 147 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RNU5E-6P-201ENST00000365574 115 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 MIR3074-201ENST00000384885 81 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 SOD2P1-201ENST00000396543 562 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AL022722.2-201ENST00000402519 180 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 UBE2FP1-201ENST00000416536 447 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 MTND4P28-201ENST00000426217 387 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC092017.2-201ENST00000427600 362 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RPL36AP53-201ENST00000432891 316 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 NDUFB1P1-201ENST00000435191 180 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AL162389.1-201ENST00000449233 177 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC073415.1-201ENST00000449240 153 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 SNORD97-201ENST00000459187 142 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RN7SL385P-201ENST00000468873 276 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RPL7P19-201ENST00000469948 618 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC093278.1-201ENST00000494700 600 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC026427.2-201ENST00000506228 536 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RNU6-352P-201ENST00000516908 107 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC100870.1-201ENST00000522035 505 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RAB11AP2-201ENST00000545905 639 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC126177.3-201ENST00000551839 688 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AL121576.1-201ENST00000556055 276 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RNA5SP108-201ENST00000605921 117 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 MIR6500-201ENST00000622700 86 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC022140.2-201ENST00000623500 188 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 AC093648.1-201ENST00000623546 606 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 FRG1KP-201ENST00000623592 341 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 MTND5P17-201ENST00000418405 1603 ntBASIC3.92□□□□□ -1.78
ATG4AQ8WYN0 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AL645937.1-201ENST00000641739 1652 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 Z73965.1-201ENST00000623412 2297 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 NACAP2-201ENST00000318548 624 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC073343.1-201ENST00000328239 651 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RNU6-1284P-201ENST00000363701 100 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AL583834.1-201ENST00000406943 343 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RPL21P24-201ENST00000413752 448 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RPS12P23-201ENST00000419579 400 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RPL36AP6-201ENST00000435770 321 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RPL21P133-201ENST00000443666 476 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RNU7-182P-201ENST00000459009 62 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 MRPS17P3-201ENST00000465453 385 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RPS27AP1-201ENST00000475545 471 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RPL38P4-201ENST00000502376 214 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC010486.1-201ENST00000511793 424 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 RN7SKP209-201ENST00000516888 304 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 SUB1P1-201ENST00000524415 382 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 OR5B19P-201ENST00000531766 928 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC123904.3-201ENST00000547218 814 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC120057.2-201ENST00000571520 271 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 MIR4719-201ENST00000585233 84 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AC005261.5-201ENST00000596280 355 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AL117336.2-201ENST00000602435 335 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 C8orf59P2-201ENST00000603441 271 ntBASIC3.91□□□□□ -1.78
ATG4AQ8WYN0 AL592436.1-201ENST00000605135 558 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms