Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC233702.2-202ENST00000562547 291 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC105245.1-201ENST00000581934 244 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AF230666.2-201ENST00000602328 725 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AL022067.1-201ENST00000602426 454 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC125494.3-201ENST00000602759 455 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC007349.4-201ENST00000608114 532 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AC024581.2-201ENST00000619986 252 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 AL356473.1-201ENST00000406203 1408 ntBASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
SPTSSBQ8NFR3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 MIR126-201ENST00000362291 85 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 RNA5SP267-201ENST00000364893 126 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 MIR196B-201ENST00000384852 84 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 MIR135A2-201ENST00000384854 100 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 PTMAP2-201ENST00000397627 327 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 HMGB1P17-201ENST00000403495 628 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 NDUFS5P1-201ENST00000405668 289 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 VN1R36P-201ENST00000414936 291 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 UBE2D3P1-201ENST00000436669 444 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 CBWD4P-201ENST00000445695 655 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AP001992.1-205ENST00000462248 379 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 LARP1BP2-201ENST00000486594 519 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC006390.1-201ENST00000508068 283 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC023632.4-201ENST00000517783 191 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AP005435.4-201ENST00000529514 284 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 LSM6P2-201ENST00000552208 177 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 DUXAP1-201ENST00000556632 463 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 MIR4713-201ENST00000582691 75 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC007448.1-201ENST00000582714 234 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AP000403.1-201ENST00000603349 851 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 MIR6758-201ENST00000620653 63 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 AC011330.2-201ENST00000621680 635 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 PISRT1-201ENST00000626175 531 ntBASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SPTSSBQ8NFR3 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 MIR221-201ENST00000385135 110 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 ATF1P1-201ENST00000406040 927 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 RN7SKP51-201ENST00000410781 304 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 VN1R51P-201ENST00000411675 945 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 HMGB1P11-201ENST00000413899 637 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC233981.1-201ENST00000423224 461 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC019097.1-201ENST00000424783 735 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC105272.1-201ENST00000438604 198 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC044797.1-201ENST00000445744 679 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 SNORD109B-201ENST00000458961 67 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 SNORD109A-201ENST00000459128 67 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC114801.2-201ENST00000503825 781 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC113420.1-201ENST00000507903 571 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 TPT1P8-201ENST00000510120 555 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 RNA5SP341-201ENST00000516261 117 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 RNA5SP165-201ENST00000517142 115 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC136624.4-201ENST00000573044 370 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 MIR3126-201ENST00000577443 74 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC115989.2-201ENST00000578640 563 ntBASIC1.01□□□□□ -2.25
SPTSSBQ8NFR3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms