Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 AC244205.2-202ENST00000635781 342 ntBASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 MTND1P37-201ENST00000636562 264 ntBASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ZNF548Q8NEK5 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ZNF548Q8NEK5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL136964.1-201ENST00000622038 2990 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RNA5SP258-201ENST00000362750 119 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 Y_RNA.86-201ENST00000363020 111 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 SNORA69-201ENST00000383895 132 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RNU6-1207P-201ENST00000384343 107 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RPL7P60-201ENST00000397636 735 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 OR9R1P-201ENST00000412200 877 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RPL31P2-201ENST00000413849 377 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RPL21P109-201ENST00000422213 475 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL606489.2-201ENST00000433886 234 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 HSPD1P21-201ENST00000436541 245 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RPS15AP9-201ENST00000439856 381 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC016691.1-201ENST00000441321 413 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC093019.1-201ENST00000443135 252 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 PPIAP3-201ENST00000450588 505 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 NDUFS5P3-201ENST00000450668 321 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 PRSS3P4-201ENST00000453323 162 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC055855.1-201ENST00000489563 579 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 FGF7P4-201ENST00000509595 295 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RN7SKP18-201ENST00000516005 275 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 RNU6-1220P-201ENST00000517126 108 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC090877.1-201ENST00000561418 344 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC090615.1-201ENST00000577519 154 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 MIR3146-201ENST00000580367 79 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 SRGNP1-201ENST00000603392 451 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AL136363.1-201ENST00000605349 337 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 U3.45-201ENST00000607547 219 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC015967.1-201ENST00000619893 476 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 AC079597.1-201ENST00000624306 508 ntBASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.71□□□□□ -1.82
ZNF548Q8NEK5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC007283.2-201ENST00000424739 197 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC006548.1-201ENST00000427470 102 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 RPL7P28-201ENST00000437739 740 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 CYCSP43-201ENST00000438233 310 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC106707.2-201ENST00000484182 374 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC110768.1-201ENST00000509222 400 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC010486.1-201ENST00000511793 424 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 RNA5SP337-201ENST00000517007 109 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AP003497.1-201ENST00000528472 562 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 ARL2BPP2-201ENST00000550907 489 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 SETP2-201ENST00000553886 926 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 HMGB1P6-201ENST00000569046 646 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC015917.1-201ENST00000579654 510 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.7□□□□□ -1.82
ZNF548Q8NEK5 AC024940.5-201ENST00000622889 474 ntBASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms