Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RNA5SP455-201ENST00000365190 119 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.416-201ENST00000384014 113 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.477-201ENST00000384352 108 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 RNU4-61P-201ENST00000411243 107 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 RNF10P1-201ENST00000418589 369 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 CYP4F29P-201ENST00000420685 446 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC096920.1-201ENST00000423991 241 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AL590383.1-201ENST00000428602 75 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC004383.1-201ENST00000438135 289 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 GAPDHP58-201ENST00000438477 1006 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 NXT1P1-201ENST00000458481 316 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 snoU13.24-201ENST00000458998 104 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC067942.3-201ENST00000512025 362 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 Y_RNA.673-201ENST00000516306 88 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 MIR2355-201ENST00000517199 87 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 MIR4660-201ENST00000583549 74 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC012433.1-201ENST00000588916 398 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 SNRPGP15-201ENST00000600149 222 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AC068768.2-201ENST00000602352 343 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 AL139099.4-201ENST00000614802 114 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 OR4F13P-202ENST00000560066 2054 ntBASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
DEPDC4Q8N2C3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 RNU2-25P-201ENST00000411041 191 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-130P-201ENST00000411112 103 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 RAC1P3-201ENST00000416129 580 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 TMEM183AP1-205ENST00000432739 290 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 SNORD108-201ENST00000459332 71 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AC023424.1-201ENST00000496058 459 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AL442163.3-201ENST00000554110 156 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 MIR6793-201ENST00000612376 63 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 AC090132.2-201ENST00000615881 347 ntBASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
DEPDC4Q8N2C3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC092376.2-201ENST00000622621 4116 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 MUC2-202ENST00000613187 4845 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RNA5SP110-201ENST00000362638 115 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-227P-201ENST00000362865 103 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 U3.6-201ENST00000363622 211 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 MIR190B-201ENST00000401119 79 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RPS29P13-201ENST00000402041 169 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-121P-201ENST00000410525 99 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-1203P-201ENST00000410703 110 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC079355.1-201ENST00000421770 223 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RPS17P8-201ENST00000434525 335 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RPS29P27-201ENST00000463711 170 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AL122020.1-201ENST00000472287 459 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 SNORA31.19-201ENST00000517079 126 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RNA5SP340-201ENST00000517132 107 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 RNU6-111P-201ENST00000517179 105 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC051619.2-201ENST00000559063 397 ntBASIC5.24□□□□□ -1.57
DEPDC4Q8N2C3 AC026470.2-201ENST00000561492 181 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms