Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 MIR4716-201ENST00000579628 84 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC015917.1-201ENST00000579654 510 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC018638.8-201ENST00000588755 281 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC011712.1-201ENST00000588959 234 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL359999.1-201ENST00000604513 294 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC113194.1-201ENST00000606037 500 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL133255.1-201ENST00000606374 441 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL365204.3-201ENST00000612448 685 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL133173.2-201ENST00000614270 90 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC002550.2-201ENST00000621246 394 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AL160413.1-201ENST00000622780 310 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC024940.5-201ENST00000622889 474 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SYNE4Q8N205 AC004944.1-201ENST00000517807 3059 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.47□□□□□ -1.69
SYNE4Q8N205 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SYNE4Q8N205 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
SYNE4Q8N205 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SYNE4Q8N205 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SYNE4Q8N205 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 ELL2P4-201ENST00000446870 1376 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC011155.1-201ENST00000316512 456 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.510-201ENST00000384511 114 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.548-201ENST00000384656 105 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 RPS4XP8-201ENST00000402039 771 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 MIR1302-11-201ENST00000408051 138 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 MIR1302-9-201ENST00000408365 138 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 MIR1302-10-201ENST00000408734 138 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC007283.2-201ENST00000424739 197 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC233279.1-201ENST00000455300 423 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC093278.1-201ENST00000494700 600 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 NIPA2P2-201ENST00000496376 1083 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC016065.2-201ENST00000514530 444 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC112206.3-201ENST00000514578 389 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 RNU6-277P-201ENST00000516272 106 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC105029.1-201ENST00000520250 669 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 COX6CP8-201ENST00000522620 226 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 MIR3167-201ENST00000579623 85 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC012493.2-201ENST00000595083 291 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 MIR1302-2-201ENST00000607096 138 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 RNU6-87P-201ENST00000607561 108 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 MIR7851-201ENST00000610611 160 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.812-201ENST00000610788 101 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.784-201ENST00000613803 101 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.787-201ENST00000616522 101 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC131238.1-201ENST00000617135 328 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.780-201ENST00000617336 101 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 Y_RNA.801-201ENST00000619005 101 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.46□□□□□ -1.7
SYNE4Q8N205 AC087190.4-201ENST00000574616 8334 ntBASIC4.46□□□□□ -1.7
SYNE4Q8N205 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE4Q8N205 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 AC130650.2-201ENST00000618736 2403 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE4Q8N205 Y_RNA.67-201ENST00000362870 100 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 RNU6-1322P-201ENST00000364309 107 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 RNU6-1158P-201ENST00000391167 107 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 RPL23AP32-201ENST00000395315 459 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 EIF4EP1-201ENST00000422311 642 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 OR51AB1P-201ENST00000429046 620 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 RPL12P46-201ENST00000436610 195 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 CALM1P1-201ENST00000442082 433 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 AC010655.1-201ENST00000449336 292 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 AC022795.1-201ENST00000473808 480 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SYNE4Q8N205 AC104057.1-201ENST00000515547 497 ntBASIC4.45□□□□□ -1.7
SYNE4Q8N205 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.45□□□□□ -1.7
SYNE4Q8N205 AL355375.2-201ENST00000574825 175 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms