Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 CR383656.7-201ENST00000548164 174 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 HMGB1P14-201ENST00000557424 591 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 MYL12BP1-201ENST00000569826 507 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 BNIP3P24-201ENST00000593398 557 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 AL031176.1-201ENST00000604554 466 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 AC069545.1-201ENST00000605671 358 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 AC010872.1-201ENST00000624225 675 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 MIR1291-201ENST00000627649 87 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 AC069528.2-201ENST00000624849 1991 ntBASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CDKL3Q8IVW4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC107982.1-201ENST00000507171 1300 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RNU6-216P-201ENST00000363282 104 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RNU6-461P-201ENST00000364195 107 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 snoZ40.1-201ENST00000364540 72 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RNU1-51P-201ENST00000365345 176 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RNU6-1197P-201ENST00000391183 107 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL450338.1-201ENST00000407987 512 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RNU2-43P-201ENST00000410306 190 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL449283.1-202ENST00000418249 604 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC007435.1-201ENST00000421086 415 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL365496.1-201ENST00000426885 215 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL513328.1-201ENST00000446460 224 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RPL39P6-201ENST00000448289 150 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC011753.1-201ENST00000451001 220 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC108938.1-201ENST00000451204 136 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL109741.2-201ENST00000455561 343 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RPS3P1-201ENST00000456781 192 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 LINC00888-204ENST00000487386 421 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RPL30P5-201ENST00000494923 336 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 RNA5SP82-201ENST00000516707 92 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC010376.1-201ENST00000522101 334 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 SUB1P1-201ENST00000524415 382 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC087276.1-201ENST00000529659 480 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC025281.1-201ENST00000567026 265 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 MIR3162-201ENST00000581818 82 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC015688.2-201ENST00000584523 262 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 TPMTP1-201ENST00000592307 737 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL390838.2-201ENST00000602394 274 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC123767.1-202ENST00000620407 817 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AL049777.1-201ENST00000622740 518 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC004808.1-201ENST00000627671 721 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 AC013437.2-201ENST00000639587 677 ntBASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.45□□□□□ -2.02
CDKL3Q8IVW4 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AL139276.1-201ENST00000311910 1001 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 SNRPEP3-201ENST00000338402 276 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 RNU4-51P-201ENST00000364206 140 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 MIR144-201ENST00000384886 86 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AL513475.1-201ENST00000406602 315 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 BEND7P1-201ENST00000422058 457 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC024082.2-201ENST00000434771 238 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC092427.1-201ENST00000439177 601 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 MTCYBP11-201ENST00000447254 1109 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AL049714.1-201ENST00000466686 347 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 RPS15AP17-201ENST00000470598 390 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 MTCYBP16-201ENST00000509187 1129 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 RNA5SP148-201ENST00000516527 94 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 MIR4658-201ENST00000584344 65 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AL137847.3-201ENST00000611521 109 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC011890.2-201ENST00000613393 294 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 MIR6895-201ENST00000613497 78 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC004852.3-201ENST00000614131 326 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AP003485.2-201ENST00000623636 610 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 AC120349.2-201ENST00000625002 298 ntBASIC2.44□□□□□ -2.02
CDKL3Q8IVW4 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 SNORA40.2-201ENST00000390847 128 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 Z75741.2-201ENST00000417272 1167 ntBASIC2.43□□□□□ -2.02
CDKL3Q8IVW4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms