Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AL138820.1-201ENST00000617901 5305 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RNU6-212P-201ENST00000362642 104 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RNU4-44P-201ENST00000363050 141 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 SNORA70.2-201ENST00000364506 135 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RNA5SP505-201ENST00000364748 108 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 SNORA36C-201ENST00000384289 132 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RNU6-1179P-201ENST00000384667 107 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 SNORA68.2-201ENST00000391263 128 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AL078599.1-201ENST00000402075 293 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AL513475.1-201ENST00000406602 315 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 MIR548H3-201ENST00000408771 118 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 OR2AM1P-201ENST00000422137 422 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC068287.1-201ENST00000430283 295 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC098831.1-201ENST00000440661 216 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RANP8-201ENST00000444720 713 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 TMSB4XP3-201ENST00000445144 114 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 SUMO2P6-201ENST00000505273 288 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 NDUFB4P9-201ENST00000511646 388 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RNU6-397P-201ENST00000516226 104 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC122688.1-201ENST00000541494 223 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC008033.2-201ENST00000542626 177 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AL049839.1-201ENST00000556151 657 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC009852.2-201ENST00000567898 485 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC004584.2-201ENST00000570407 410 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AL020997.2-201ENST00000602607 184 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 MIR3976-201ENST00000606807 139 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 RNA5SP439-201ENST00000617595 124 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 AC138965.3-201ENST00000623875 498 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 OR9K1P-202ENST00000641111 3217 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 OR4F13P-202ENST00000560066 2054 ntBASIC5.6□□□□□ -1.51
RNF135Q8IUD6 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.6□□□□□ -1.51
RNF135Q8IUD6 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RNA5SP52-201ENST00000362448 134 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RNU6-545P-201ENST00000362681 104 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 SNORA70.6-201ENST00000383934 134 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RN7SKP27-201ENST00000410684 333 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AC007161.1-204ENST00000423039 460 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AL139109.1-201ENST00000455491 297 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RPS23P7-201ENST00000466210 444 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RN7SL197P-201ENST00000466981 299 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 TRBVB-201ENST00000477100 408 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RPS17P5-201ENST00000498293 408 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RNU6-927P-201ENST00000516199 100 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RNU5B-3P-201ENST00000516601 115 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 MIR1254-2-201ENST00000579553 63 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 SNORD84-203ENST00000584275 78 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AP000769.2-201ENST00000602344 396 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AC006557.5-201ENST00000603126 811 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AL390123.1-201ENST00000603216 237 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RNF138P2-201ENST00000603490 592 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 MIR1244-1-201ENST00000612829 85 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AC099669.2-201ENST00000616549 437 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 RMST_4.1-201ENST00000616886 107 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AL159153.1-201ENST00000619688 317 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AL353748.2-201ENST00000622148 471 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 AC130454.1-201ENST00000622948 401 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 MIR1244-3-201ENST00000635744 85 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 MIR1244-2-201ENST00000636449 85 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 Z99571.1-201ENST00000636677 394 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 MIR1244-4-202ENST00000636813 85 ntBASIC5.59□□□□□ -1.51
RNF135Q8IUD6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
RNF135Q8IUD6 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms