Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.4□□□□□ -1.87
PRPF39Q86UA1 AP003122.6-201ENST00000623831 495 ntBASIC3.4□□□□□ -1.87
PRPF39Q86UA1 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.4□□□□□ -1.87
PRPF39Q86UA1 AC079416.3-201ENST00000624479 549 ntBASIC3.4□□□□□ -1.87
PRPF39Q86UA1 SNORA50A-202ENST00000629536 136 ntBASIC3.4□□□□□ -1.87
PRPF39Q86UA1 AC006927.3-201ENST00000638789 384 ntBASIC3.4□□□□□ -1.87
PRPF39Q86UA1 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
PRPF39Q86UA1 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
PRPF39Q86UA1 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 RNU5A-8P-201ENST00000364102 114 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 SAR1AP2-201ENST00000392696 594 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AL513331.1-201ENST00000411908 397 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AL451054.2-201ENST00000420896 202 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AL512649.1-201ENST00000428997 581 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 ISCA1P2-201ENST00000438679 421 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 GAPDHP27-201ENST00000447427 1020 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC092798.1-201ENST00000458542 409 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 MTND4LP3-201ENST00000468320 276 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC110794.1-201ENST00000505816 425 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AF131216.2-201ENST00000512316 564 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 RNU6-1282P-201ENST00000516735 96 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 IGHV3-76-201ENST00000522465 295 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC093012.1-202ENST00000549403 582 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 HIGD1AP1-201ENST00000550979 275 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 MIR5680-201ENST00000577577 84 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 NIFKP6-201ENST00000598115 845 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC005000.2-201ENST00000605468 310 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC018638.7-201ENST00000605836 1114 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC026790.2-201ENST00000606282 430 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC099778.2-201ENST00000610904 211 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AC093591.3-201ENST00000634516 308 ntBASIC3.39□□□□□ -1.87
PRPF39Q86UA1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PRPF39Q86UA1 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 RNU6-500P-201ENST00000362349 107 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 SNORA48.8-201ENST00000391324 134 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 Z85995.1-201ENST00000415547 335 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC109583.1-201ENST00000432156 268 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 Z82210.1-201ENST00000440037 231 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 ATP5C1P1-201ENST00000441945 895 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 BZW1P2-201ENST00000473537 826 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC010631.1-201ENST00000474150 156 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 KC877373.1-201ENST00000479066 408 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 LARP1BP2-201ENST00000486594 519 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 RNU1-143P-201ENST00000516296 146 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 DEFB108A-201ENST00000530110 222 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 RPL21P12-201ENST00000559810 515 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC034105.3-201ENST00000565294 442 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AL606834.2-201ENST00000602954 668 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 YPEL5P2-201ENST00000605553 359 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 U1.23-201ENST00000610293 146 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AL161629.2-201ENST00000615347 275 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 RNU1-68P-201ENST00000615382 146 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 MIR7112-201ENST00000616126 65 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 MIR8057-201ENST00000620957 69 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 AL356321.1-201ENST00000621360 228 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 U1.39-201ENST00000621562 146 ntBASIC3.38□□□□□ -1.87
PRPF39Q86UA1 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PRPF39Q86UA1 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
PRPF39Q86UA1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms