Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB1Q86U70 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 ST13P20-201ENST00000447996 1065 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AL358232.1-201ENST00000448030 501 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 SSXP4-201ENST00000451349 245 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 HMGN1P18-201ENST00000457642 277 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 RPS20P20-201ENST00000460498 340 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 RPL21P10-201ENST00000463521 490 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB1Q86U70 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB1Q86U70 AC105313.1-201ENST00000509121 353 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC117522.2-201ENST00000510049 657 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 DUXAP2-201ENST00000519198 589 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 AC107934.1-201ENST00000522215 217 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.29□□□□□ -1.88
LDB1Q86U70 RPL21P5-201ENST00000554662 472 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 MIR3118-1-201ENST00000581787 76 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC005771.1-201ENST00000585581 349 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC009977.1-201ENST00000586015 570 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC073544.2-201ENST00000601155 540 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC008277.2-201ENST00000605196 797 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 uc_338.1-201ENST00000612113 180 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 SDR42E1P2-201ENST00000614861 481 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.29□□□□□ -1.88
LDB1Q86U70 uc_338.12-201ENST00000616344 181 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AL356321.1-201ENST00000621360 228 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC091953.2-201ENST00000623979 160 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC099654.13-201ENST00000639774 207 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 OR4G2P-202ENST00000641004 1759 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 AC058791.1-201ENST00000608412 3198 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 RIOK3P1-201ENST00000418778 1528 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
LDB1Q86U70 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
LDB1Q86U70 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB1Q86U70 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB1Q86U70 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AL021368.2-201ENST00000606125 5352 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AC091152.2-201ENST00000591628 2569 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
LDB1Q86U70 CUL1P1-201ENST00000509510 2425 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
LDB1Q86U70 MIR7-3-201ENST00000384898 110 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 RN7SKP111-201ENST00000410349 271 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 SPA17P1-201ENST00000416656 452 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB1Q86U70 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AL590383.1-201ENST00000428602 75 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB1Q86U70 NDUFB4P6-201ENST00000436819 366 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB1Q86U70 KATNBL1P3-201ENST00000443475 909 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AL033528.1-201ENST00000453780 140 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 snoU109.1-201ENST00000459339 135 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.28□□□□□ -1.88
LDB1Q86U70 APOOP4-201ENST00000513530 597 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 RNU6-390P-201ENST00000516259 103 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AP003122.4-201ENST00000530980 758 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AC005951.2-201ENST00000576282 495 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 NBR2-204ENST00000587322 63 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 CKS1BP3-201ENST00000600888 237 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AC009570.1-201ENST00000609599 745 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AC019176.2-201ENST00000611579 315 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.28□□□□□ -1.88
LDB1Q86U70 AL355365.1-201ENST00000616480 294 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 SNHG22-203ENST00000617833 660 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AL136313.1-201ENST00000624804 202 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 AC118273.1-201ENST00000525324 3006 ntBASIC3.28□□□□□ -1.88
LDB1Q86U70 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.27□□□□□ -1.89
LDB1Q86U70 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB1Q86U70 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
LDB1Q86U70 RNY4P16-201ENST00000364768 94 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 RNY3P13-201ENST00000365542 102 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
LDB1Q86U70 SNORA40.3-201ENST00000390964 122 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 RNA5SP31-201ENST00000411144 127 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC093578.1-201ENST00000415219 368 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 TMEM167AP1-201ENST00000423409 219 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.27□□□□□ -1.89
LDB1Q86U70 SNRPEP4-201ENST00000435815 279 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 AC093156.1-201ENST00000440382 670 ntBASIC3.27□□□□□ -1.89
LDB1Q86U70 PGBD4P3-201ENST00000440731 581 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms