Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 AC073264.1-201ENST00000411508 416 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RPL21P104-201ENST00000464143 478 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 SEM1P1-201ENST00000506694 209 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RPL37P25-201ENST00000507308 276 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-711P-201ENST00000517255 106 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AF279873.1-201ENST00000523393 313 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 AL161713.1-201ENST00000555538 145 ntBASIC0.8□□□□□ -2.28
VPS13BQ7Z7G8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 RNU4-41P-201ENST00000364426 143 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 SNORA51.12-201ENST00000384448 134 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 TRAPPC2P5-201ENST00000426293 308 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AP005435.4-201ENST00000529514 284 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AL031274.2-201ENST00000599419 203 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC011330.2-201ENST00000621680 635 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 MFSD8-213ENST00000641134 1327 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 Y_RNA.30-201ENST00000362572 97 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 RN7SKP51-201ENST00000410781 304 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AL590233.1-201ENST00000430017 456 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC090453.1-201ENST00000495560 436 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 CBX3P8-201ENST00000532412 525 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 NOP56P3-201ENST00000549457 385 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 HSPE1P22-201ENST00000456856 327 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 HMGN2P13-201ENST00000476476 274 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 RN7SKP265-201ENST00000516448 223 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC090953.1-201ENST00000604305 1092 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 AC012640.5-201ENST00000623897 319 ntBASIC0.79□□□□□ -2.28
VPS13BQ7Z7G8 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AL136520.1-201ENST00000600311 1322 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 Y_RNA.251-201ENST00000364551 99 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 SNORA6-201ENST00000384033 151 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 RNU4-65P-201ENST00000410473 140 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-516P-201ENST00000411381 104 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 TRGV6-201ENST00000417928 299 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 ACTR3BP3-201ENST00000565577 979 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 MIR5000-201ENST00000577717 103 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AP003122.6-201ENST00000623831 495 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AP002907.1-201ENST00000606361 1430 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 RNU6-1263P-201ENST00000384601 106 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 HMGN1P14-201ENST00000412459 517 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC092447.6-201ENST00000414578 210 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 SETP7-201ENST00000552169 453 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC009220.3-201ENST00000604318 586 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC140725.3-201ENST00000616193 880 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AL445493.3-201ENST00000619568 477 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC025048.6-202ENST00000627667 438 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC132825.8-201ENST00000640783 297 ntBASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.78□□□□□ -2.28
VPS13BQ7Z7G8 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 PRELID3BP11-201ENST00000414230 479 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 Z75741.2-201ENST00000417272 1167 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 SNRPGP13-201ENST00000442212 177 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 MTCO2P9-201ENST00000503214 694 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 CDC42P4-201ENST00000510507 563 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 TRAV28-201ENST00000557548 323 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 VN1R107P-201ENST00000601784 209 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 AP000676.4-201ENST00000624659 623 ntBASIC0.78□□□□□ -2.29
VPS13BQ7Z7G8 AL445183.3-201ENST00000414168 502 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 RNU6-405P-201ENST00000516637 110 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 RNU6-467P-201ENST00000517027 110 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 CYCSP48-201ENST00000417124 323 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 HMGN2P20-201ENST00000437531 273 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 AC087854.1-201ENST00000519706 414 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 LLPHP1-201ENST00000603571 367 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 RNU4-91P-201ENST00000364778 135 ntBASIC0.77□□□□□ -2.29
VPS13BQ7Z7G8 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms