Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 OR1M4P-201ENST00000589199 287 ntBASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 AC012669.1-201ENST00000603209 283 ntBASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 SNORD91B-202ENST00000608459 222 ntBASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 AC009643.2-201ENST00000603543 1448 ntBASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.68□□□□□ -1.66
UBE3DQ7Z6J8 Z95331.1-201ENST00000623075 23112 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC083843.2-201ENST00000568248 6253 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 Y_RNA.126-201ENST00000363382 111 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 RNU6-1303P-201ENST00000364841 107 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 RNU6-76P-201ENST00000384060 104 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 Y_RNA.515-201ENST00000384535 112 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 Y_RNA.534-201ENST00000384599 112 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 CTSL3P-202ENST00000412179 788 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 HMGB1P9-201ENST00000429856 646 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AL158071.1-201ENST00000430315 461 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC133473.1-201ENST00000455173 299 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 SNORD127-201ENST00000458892 86 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC140172.1-201ENST00000502928 141 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC105758.1-201ENST00000506038 399 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC008716.1-201ENST00000511084 513 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 ENPP7P9-201ENST00000514456 627 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AP000889.1-201ENST00000530968 660 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC008033.2-201ENST00000542626 177 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 RN7SL652P-201ENST00000577769 300 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC233702.9-201ENST00000581528 203 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 VN1R91P-201ENST00000594377 169 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC078899.3-201ENST00000599065 212 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AL365434.2-201ENST00000607979 234 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AL161616.1-201ENST00000611867 286 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 AL731532.2-201ENST00000623542 1953 ntBASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.67□□□□□ -1.66
UBE3DQ7Z6J8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 SMG1P4-204ENST00000523028 4131 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 RNU6-1249P-201ENST00000363237 111 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 RNU4-50P-201ENST00000364361 141 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 Y_RNA.478-201ENST00000384358 107 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 SNORA70-201ENST00000384436 135 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 Y_RNA.562-201ENST00000384695 113 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 MIR625-201ENST00000385047 85 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AL445529.1-201ENST00000398713 389 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 RNU4-61P-201ENST00000411243 107 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AL353621.1-201ENST00000418219 243 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 BX276092.3-201ENST00000424182 230 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC093414.1-201ENST00000434712 514 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 RPL21P2-201ENST00000440049 481 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AL360271.2-201ENST00000447710 161 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 FCF1P4-201ENST00000448326 183 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AL031274.1-201ENST00000450334 232 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 MTCO3P8-201ENST00000453691 755 ntBASIC4.66□□□□□ -1.66
UBE3DQ7Z6J8 AC108860.1-201ENST00000484521 383 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 289 ms