Protein–RNA interactions for Protein: Q7Z3Y7

KRT28, Keratin, type I cytoskeletal 28, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28Q7Z3Y7 AL672296.1-201ENST00000427780 2158 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-359P-201ENST00000365466 108 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 SNORD115.1-201ENST00000391109 76 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC092447.6-201ENST00000414578 210 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 OOSP1P1-201ENST00000423265 274 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC022018.1-201ENST00000430685 241 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC073614.1-201ENST00000438690 650 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AL645939.1-201ENST00000453429 797 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 SETP7-201ENST00000552169 453 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC011468.4-201ENST00000603942 409 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AL031176.1-201ENST00000604554 466 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC110741.2-201ENST00000605278 268 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC110994.2-201ENST00000635481 492 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AC010733.2-201ENST00000589496 5702 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 AL136360.1-201ENST00000503377 1900 ntBASIC4.27□□□□□ -1.73
KRT28Q7Z3Y7 FAM35BP-202ENST00000497389 3337 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC095050.2-201ENST00000510748 1458 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-1249P-201ENST00000363237 111 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNY4P34-201ENST00000364779 95 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 MRPL42P2-201ENST00000403169 426 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-648P-201ENST00000410190 107 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNA5SP239-201ENST00000410218 129 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNU2-66P-201ENST00000410650 161 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC093156.1-201ENST00000440382 670 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RPL17P49-201ENST00000443728 411 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 HMGB1P25-201ENST00000468402 607 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-720P-201ENST00000516363 108 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 SNORA18.6-201ENST00000516792 115 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AP003467.2-201ENST00000520175 319 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AP000907.2-201ENST00000530827 353 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 MIR4319-201ENST00000577285 85 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 MIR3682-201ENST00000581338 84 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNA5SP108-201ENST00000605921 117 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-87P-201ENST00000607561 108 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC098614.4-201ENST00000607601 462 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC103710.1-201ENST00000610003 901 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC109347.2-201ENST00000610220 349 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 MIR486-1-201ENST00000612171 68 ntBASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.26□□□□□ -1.73
KRT28Q7Z3Y7 AC018555.1-201ENST00000567548 1980 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 RPL7P25-201ENST00000404151 721 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 Y_RNA.599-201ENST00000410489 109 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-248P-201ENST00000410720 107 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 Y_RNA.619-201ENST00000410951 90 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 MTND4LP10-201ENST00000435146 291 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 MTCYBP1-201ENST00000454315 1119 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC104308.1-201ENST00000454621 333 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 snoU13.3-201ENST00000459441 104 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 MTND1P3-201ENST00000484956 952 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC012170.1-201ENST00000495139 359 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 FCF1P3-201ENST00000496394 590 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC138853.1-201ENST00000503549 823 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 RNU6-201P-201ENST00000517100 61 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 IGHVII-62-1-201ENST00000519283 235 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC022616.6-201ENST00000520479 119 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 CR383656.7-201ENST00000548164 174 ntBASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.25□□□□□ -1.73
KRT28Q7Z3Y7 EIF1P4-201ENST00000572664 335 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms