Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 BPIFA4P-203ENST00000603168 689 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AL031176.1-201ENST00000604554 466 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AL132822.1-201ENST00000617063 513 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AL596275.2-204ENST00000641628 552 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AL596275.2-206ENST00000641957 626 ntBASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.43□□□□□ -1.54
PRPF40BQ6NWY9 MTND5P1-201ENST00000445440 1375 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 EOGT-210ENST00000615922 1931 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 XIAPP3-201ENST00000312918 795 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 Y_RNA.167-201ENST00000363735 109 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-960P-201ENST00000364056 120 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP387-201ENST00000364226 106 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 SNORA11.1-201ENST00000408133 129 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RPL21P24-201ENST00000413752 448 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RPL30P2-201ENST00000414021 291 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 UBE2FP1-201ENST00000416536 447 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC113618.1-201ENST00000416747 285 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AL590609.2-201ENST00000421430 368 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 FABP5P14-201ENST00000437273 393 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AF228730.2-201ENST00000438784 848 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RPL32P28-201ENST00000443577 397 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC010655.1-201ENST00000449336 292 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RN7SL432P-201ENST00000484057 298 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 DEFB109F-201ENST00000491870 277 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 MTCYBP40-201ENST00000509390 1135 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC098591.2-201ENST00000510152 315 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC063950.1-201ENST00000552036 308 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC138761.3-201ENST00000579993 334 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AL008729.2-201ENST00000606393 473 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 RMST_9.1-201ENST00000619945 193 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 uc_338.22-201ENST00000622722 187 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 MIR4496-201ENST00000635896 61 ntBASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.42□□□□□ -1.54
PRPF40BQ6NWY9 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 Y_RNA.28-201ENST00000362554 111 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-1188P-201ENST00000363795 107 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-196P-201ENST00000384315 107 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-601P-201ENST00000384540 107 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-1106P-201ENST00000390845 107 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RNA5SP219-201ENST00000390940 113 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RNU6-550P-201ENST00000391057 101 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RPL21P65-201ENST00000406094 466 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 PMCHL1-202ENST00000423102 261 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 CALM2P2-201ENST00000428512 440 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 PSMA2P3-201ENST00000429685 675 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RPS20P1-201ENST00000434853 354 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 RPL7P43-201ENST00000478876 753 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 HIGD1AP13-201ENST00000509878 289 ntBASIC5.41□□□□□ -1.54
PRPF40BQ6NWY9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms