Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 CYCSP25-201ENST00000525280 316 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 HMGB1P14-201ENST00000557424 591 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 AC060766.3-201ENST00000591442 263 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 SNORD113-5-201ENST00000607261 78 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 AC011476.5-201ENST00000615594 130 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 MIR6861-201ENST00000618657 64 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 SMG1P4-204ENST00000523028 4131 ntBASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.38□□□□□ -1.71
CDPF1Q6NVV7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 ZNF826P-207ENST00000622273 1910 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 Y_RNA.240-201ENST00000364469 95 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 MIR10A-201ENST00000385043 110 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 LAP3P1-201ENST00000403648 294 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 MIR1275-201ENST00000408770 80 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC130360.1-201ENST00000425489 1117 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 snoU13.30-201ENST00000458951 104 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 OR7H2P-201ENST00000513483 306 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 SNORD116-28-201ENST00000516123 91 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 RN7SKP288-201ENST00000516227 268 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 RNU4ATAC-201ENST00000580972 127 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 MIR4282-201ENST00000583613 67 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC012368.3-201ENST00000604190 219 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC037487.3-201ENST00000606668 112 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 SNORA74.4-201ENST00000607595 199 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 MIR6811-201ENST00000620409 58 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AC090617.7-201ENST00000623952 126 ntBASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CDPF1Q6NVV7 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AC006206.1-201ENST00000544842 3387 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AL591135.1-201ENST00000401578 5914 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 Y_RNA.233-201ENST00000364407 101 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RNU4-9P-201ENST00000364951 139 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 Y_RNA.304-201ENST00000365011 112 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RNU6-1074P-201ENST00000383995 104 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RNU6-1027P-201ENST00000383998 107 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 MIR514A1-201ENST00000385133 98 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RNU6-394P-201ENST00000410735 107 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RN7SKP51-201ENST00000410781 304 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 MTCO1P39-201ENST00000426148 480 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RPL23AP81-201ENST00000455252 467 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 VPS25P1-201ENST00000455691 508 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AC010326.1-201ENST00000462726 602 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RNU6-377P-201ENST00000515965 102 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 AL161713.1-201ENST00000555538 145 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 RPL21P7-201ENST00000557463 483 ntBASIC4.36□□□□□ -1.71
CDPF1Q6NVV7 NDUFB4P11-201ENST00000560510 395 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms