Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 MIR208A-201ENST00000362287 71 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 PTMAP2-201ENST00000397627 327 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 RNU2-47P-201ENST00000410649 186 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 RPL30P2-201ENST00000414021 291 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 SCARNA18-201ENST00000459004 134 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 HMGB1P25-201ENST00000468402 607 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 RN7SL812P-201ENST00000493791 279 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 SNORD116-26-201ENST00000516006 96 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 RNU6-976P-201ENST00000516086 111 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 IGKV2D-36-201ENST00000518643 226 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AC009902.1-201ENST00000519351 183 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 COPS8P3-201ENST00000526024 482 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AP003385.6-201ENST00000531603 374 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 FAM27D1-201ENST00000612308 341 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AL021997.2-201ENST00000615674 271 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AL133243.3-201ENST00000617415 3004 ntBASIC5.47□□□□□ -1.53
USPL1Q5W0Q7 AC006971.1-201ENST00000407916 4486 ntBASIC5.46□□□□□ -1.53
USPL1Q5W0Q7 AC007823.1-201ENST00000569932 1566 ntBASIC5.46□□□□□ -1.53
USPL1Q5W0Q7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.53
USPL1Q5W0Q7 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 Y_RNA.133-201ENST00000363428 110 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 RNA5SP175-201ENST00000364275 119 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 SNORD116-11-201ENST00000383882 92 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 PSMA2P3-201ENST00000429685 675 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 RPL32P28-201ENST00000443577 397 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 RPL7P43-201ENST00000478876 753 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 Y_RNA.720-201ENST00000517166 92 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AL121576.1-201ENST00000556055 276 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC106782.4-201ENST00000568264 210 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC138761.3-201ENST00000579993 334 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC174048.1-201ENST00000603389 144 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 TUG1_2.1-201ENST00000614234 87 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 MIR6075-201ENST00000620782 95 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 EOGT-210ENST00000615922 1931 ntBASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.46□□□□□ -1.54
USPL1Q5W0Q7 NOL8P1-201ENST00000508336 3529 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 MTND5P1-201ENST00000445440 1375 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC126323.6-202ENST00000568092 3511 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 SNORA71.3-201ENST00000362582 128 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 Y_RNA.135-201ENST00000363439 95 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 5S_rRNA.1-201ENST00000364415 116 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 Y_RNA.399-201ENST00000383955 105 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 RNU6-1127P-201ENST00000384580 107 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 UBE2FP1-201ENST00000416536 447 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 SKA2P1-201ENST00000425592 390 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AL358176.2-201ENST00000425769 204 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC005019.1-201ENST00000436455 431 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 RPL23AP89-201ENST00000439324 255 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 TXNP1-201ENST00000441872 371 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 MTCO3P45-201ENST00000443036 613 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 RPS15AP27-201ENST00000449183 343 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AL162389.1-201ENST00000449233 177 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC008481.1-201ENST00000463278 396 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC021146.2-201ENST00000504736 556 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC008521.1-201ENST00000587471 187 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 HMGB2P1-201ENST00000591146 634 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AL138889.2-201ENST00000603883 242 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AC099669.2-201ENST00000616549 437 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 AL132822.1-201ENST00000617063 513 ntBASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
USPL1Q5W0Q7 RMST_9.1-201ENST00000619945 193 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms