Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AL109741.2-201ENST00000455561 343 ntBASIC1.11□□□□□ -2.23
RIF1Q5UIP0 RPL30P6-201ENST00000475925 342 ntBASIC1.11□□□□□ -2.23
RIF1Q5UIP0 AC023790.1-201ENST00000482174 347 ntBASIC1.11□□□□□ -2.23
RIF1Q5UIP0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.11□□□□□ -2.23
RIF1Q5UIP0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
RIF1Q5UIP0 AP002907.1-201ENST00000606361 1430 ntBASIC1.11□□□□□ -2.23
RIF1Q5UIP0 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.11□□□□□ -2.23
RIF1Q5UIP0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 RNA5SP295-201ENST00000362655 121 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AL360221.1-201ENST00000445989 335 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AC087190.1-201ENST00000484462 480 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AC023424.2-201ENST00000493479 777 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 OR4V1P-201ENST00000525394 1140 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AC005498.1-201ENST00000592125 465 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AL355596.1-201ENST00000565399 3996 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 RNU1-148P-201ENST00000384472 162 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AC107032.1-201ENST00000485945 480 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.1□□□□□ -2.23
RIF1Q5UIP0 AC007742.2-201ENST00000618226 398 ntBASIC1.1□□□□□ -2.23
RIF1Q5UIP0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
RIF1Q5UIP0 DEFB108F-201ENST00000344638 222 ntBASIC1.09□□□□□ -2.23
RIF1Q5UIP0 Y_RNA.549-201ENST00000384657 102 ntBASIC1.09□□□□□ -2.23
RIF1Q5UIP0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.09□□□□□ -2.23
RIF1Q5UIP0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.09□□□□□ -2.23
RIF1Q5UIP0 RNA5SP309-201ENST00000516670 106 ntBASIC1.09□□□□□ -2.23
RIF1Q5UIP0 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
RIF1Q5UIP0 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC1.09□□□□□ -2.23
RIF1Q5UIP0 ACTR3BP3-201ENST00000565577 979 ntBASIC1.09□□□□□ -2.23
RIF1Q5UIP0 MIR1197-201ENST00000408818 88 ntBASIC1.09□□□□□ -2.24
RIF1Q5UIP0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
RIF1Q5UIP0 PTGES3P5-201ENST00000455109 434 ntBASIC1.09□□□□□ -2.24
RIF1Q5UIP0 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.09□□□□□ -2.24
RIF1Q5UIP0 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.09□□□□□ -2.24
RIF1Q5UIP0 RNA5SP331-201ENST00000364986 107 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AL031775.1-201ENST00000607014 887 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 MTND5P9-201ENST00000503854 1755 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 RNU6-115P-201ENST00000364310 107 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 RNU6-997P-201ENST00000384725 107 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 RNU2-37P-201ENST00000410695 177 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AC234064.1-201ENST00000436312 247 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 RPS26P21-201ENST00000475397 348 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 RPL21P131-201ENST00000497298 483 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 XIST_intron.1-201ENST00000619444 68 ntBASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.08□□□□□ -2.24
RIF1Q5UIP0 AL359851.1-201ENST00000569460 4997 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 VTRNA1-3-201ENST00000365645 89 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 MIR532-201ENST00000385025 91 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 RPL30P4-201ENST00000429309 333 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 SNRPGP3-201ENST00000469405 227 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AC118942.1-201ENST00000529674 1035 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 MTCO3P24-201ENST00000572729 782 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 RNU6-84P-201ENST00000607737 102 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.07□□□□□ -2.24
RIF1Q5UIP0 OR51B8P-201ENST00000449892 769 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 RNU11-2P-201ENST00000516898 142 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 RNU4-60P-201ENST00000517239 135 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AP004242.1-201ENST00000533701 349 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 AC005034.5-201ENST00000604219 466 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 RPL23AP88-201ENST00000605759 454 ntBASIC1.07□□□□□ -2.24
RIF1Q5UIP0 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AC090740.1-201ENST00000623193 2262 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 Y_RNA.518-201ENST00000384552 113 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 RNU2-40P-201ENST00000410833 196 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 RPS27AP10-201ENST00000496103 208 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 DUXAP11-201ENST00000603858 526 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 BNIP3P7-201ENST00000605641 516 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AC090617.7-201ENST00000623952 126 ntBASIC1.06□□□□□ -2.24
RIF1Q5UIP0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.06□□□□□ -2.24
RIF1Q5UIP0 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms