Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AL391646.1-201ENST00000603860 190 ntBASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 MIR6840-201ENST00000611937 71 ntBASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AC135776.4-201ENST00000624300 1904 ntBASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AC111188.2-201ENST00000529697 1387 ntBASIC0.84□□□□□ -2.27
VPS13DQ5THJ4 AC104472.2-201ENST00000469035 601 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 SUB1P4-201ENST00000566062 339 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 RNU1-78P-201ENST00000391248 165 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 RPL7P27-201ENST00000403775 720 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 TRIM60P13-201ENST00000432350 1283 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 AP003033.1-201ENST00000527244 415 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 AC073413.2-201ENST00000604332 360 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 MIR6078-201ENST00000611069 100 ntBASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC0.84□□□□□ -2.28
VPS13DQ5THJ4 DEFB109C-201ENST00000382575 264 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 DEFB109B-201ENST00000382656 264 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AL591704.1-201ENST00000432574 275 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 RPL17P49-201ENST00000443728 411 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 RNA5SP364-201ENST00000516938 78 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 RNU6-1223P-201ENST00000517124 104 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC068135.2-201ENST00000569293 1028 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC006338.1-201ENST00000618453 749 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 SNRPGP13-201ENST00000442212 177 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 SETP7-201ENST00000552169 453 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 RNU1-148P-201ENST00000384472 162 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC079597.1-201ENST00000624306 508 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 AC025048.6-202ENST00000627667 438 ntBASIC0.83□□□□□ -2.28
VPS13DQ5THJ4 SUMO2P12-201ENST00000405924 140 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 MTCO1P43-201ENST00000431831 488 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 MTND4LP12-201ENST00000448237 295 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 ANP32BP3-201ENST00000559213 706 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 MIR1273G-201ENST00000577677 100 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC112503.2-201ENST00000609005 552 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC121761.2-201ENST00000617300 689 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AL031601.2-202ENST00000622650 282 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC007098.1-201ENST00000420122 367 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 SDCBPP1-201ENST00000440192 890 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 OR6K5P-201ENST00000447050 945 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 MTCO1P48-201ENST00000448024 1096 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC009474.2-201ENST00000451383 136 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AP002345.1-201ENST00000456493 928 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 MTCO2P9-201ENST00000503214 694 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 DNAJC8P1-201ENST00000554535 372 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 SSXP4-201ENST00000451349 245 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 RNU4-91P-201ENST00000364778 135 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 RNU2-44P-201ENST00000516795 194 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AC087854.1-201ENST00000519706 414 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 CBX3P8-201ENST00000532412 525 ntBASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.82□□□□□ -2.28
VPS13DQ5THJ4 ANAPC10P1-201ENST00000395991 556 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 PGBD4P6-201ENST00000421501 610 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 OR5BM1P-201ENST00000512021 366 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 OR4R1P-201ENST00000529879 463 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AP005137.2-201ENST00000609238 400 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 DDX43P2-201ENST00000604753 1354 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AL512504.1-201ENST00000415494 778 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 RPL31P63-201ENST00000422565 375 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 GPM6BP3-201ENST00000442797 145 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AC008427.1-201ENST00000503102 655 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AC025918.2-201ENST00000558683 763 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 SEPT7P9-203ENST00000604116 343 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AC009318.3-201ENST00000616916 503 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 AP000560.1-201ENST00000624150 1937 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 RNU1-133P-201ENST00000364867 167 ntBASIC0.81□□□□□ -2.28
VPS13DQ5THJ4 UBE2V1P13-201ENST00000436983 439 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms