Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 JKAMPP1-201ENST00000413804 919 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 MTND1P2-201ENST00000430604 821 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 CALM1P1-201ENST00000442082 433 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC034105.3-201ENST00000565294 442 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC024619.4-201ENST00000580924 316 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC034102.8-201ENST00000615146 484 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC002553.4-201ENST00000616896 331 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC233309.1-201ENST00000619522 751 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 AC018555.1-201ENST00000567548 1980 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 API5P2-201ENST00000397055 1498 ntBASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
CCDC144BQ3MJ40 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 Y_RNA.89-201ENST00000363031 102 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-1090P-201ENST00000364065 94 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 Y_RNA.255-201ENST00000364581 97 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-61P-201ENST00000365528 109 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 SNORA69-201ENST00000383895 132 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 SOD2P1-201ENST00000396543 562 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RNU2-29P-201ENST00000410423 189 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AMD1P2-201ENST00000412936 992 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 SNRPEP10-201ENST00000420249 274 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AC093106.2-201ENST00000428212 385 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RPS20P22-201ENST00000473700 357 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RN7SL604P-201ENST00000492589 296 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RNA5SP291-201ENST00000517222 105 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 ADI1P3-201ENST00000549509 470 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 CBX3P5-201ENST00000552017 521 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RN7SL703P-201ENST00000578485 302 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AC004825.2-201ENST00000616634 455 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.8□□□□□ -1.64
CCDC144BQ3MJ40 AC006020.1-201ENST00000420179 1854 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC090740.1-201ENST00000623193 2262 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 RNA5SP502-201ENST00000362694 119 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 SNORA62.3-201ENST00000365110 153 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 RNU6-190P-201ENST00000384154 102 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AL591416.1-201ENST00000404015 867 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 RPS29P7-201ENST00000439662 171 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 FABP5P13-201ENST00000452144 328 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 RN7SL585P-201ENST00000470538 280 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 RPL31P60-201ENST00000478450 367 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC090281.1-201ENST00000523019 276 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 RANP3-201ENST00000530970 276 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 OR5B19P-201ENST00000531766 928 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AL352979.3-201ENST00000553515 247 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC007424.1-203ENST00000554613 687 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 MIR4444-1-201ENST00000581696 74 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 MIR4444-2-201ENST00000584390 74 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AP000907.4-201ENST00000604143 237 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AL359547.2-201ENST00000615810 418 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 YWHAEP7-203ENST00000622054 312 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 AC008013.2-202ENST00000637965 364 ntBASIC4.79□□□□□ -1.64
CCDC144BQ3MJ40 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms