Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC1.91□□□□□ -2.1
HOXC5Q00444 DUXAP10-204ENST00000612052 616 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
HOXC5Q00444 AC004852.3-201ENST00000614131 326 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 HOTTIP_4.1-201ENST00000618195 165 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.91□□□□□ -2.1
HOXC5Q00444 AC080188.3-201ENST00000624842 748 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.91□□□□□ -2.1
HOXC5Q00444 RNU5A-1-201ENST00000362698 116 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 RN7SKP32-201ENST00000410167 303 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AL139156.1-201ENST00000412785 841 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC5Q00444 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.9□□□□□ -2.11
HOXC5Q00444 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.9□□□□□ -2.11
HOXC5Q00444 BEND7P1-201ENST00000422058 457 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 MTCO3P30-201ENST00000426425 670 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AL512637.2-201ENST00000431287 1256 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 MYL8P-204ENST00000431574 518 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 GTF2IP20-201ENST00000431663 360 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 OR4K11P-201ENST00000431829 904 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC5Q00444 AC009237.8-201ENST00000445492 379 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 RNU6-420P-201ENST00000458780 107 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 RNU7-26P-201ENST00000458980 63 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC025033.1-201ENST00000463883 194 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HOXC5Q00444 AC013828.1-201ENST00000481845 158 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC098799.1-201ENST00000504752 800 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 COX7A2P2-201ENST00000505291 250 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC091860.1-201ENST00000505723 432 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 COX6CP5-201ENST00000527162 228 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC5Q00444 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC5Q00444 SNRPGP18-201ENST00000553000 214 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC5Q00444 MIR4789-201ENST00000577469 82 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC002984.1-201ENST00000591692 448 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AL355877.2-201ENST00000603670 358 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HOXC5Q00444 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.9□□□□□ -2.11
HOXC5Q00444 TUG1_1.1-201ENST00000610654 145 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC5Q00444 Y_RNA.783-201ENST00000613546 102 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
HOXC5Q00444 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 AC010872.1-201ENST00000624225 675 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
HOXC5Q00444 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.9□□□□□ -2.11
HOXC5Q00444 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC5Q00444 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.9□□□□□ -2.11
HOXC5Q00444 CR848007.1-201ENST00000442354 1699 ntBASIC1.9□□□□□ -2.11
HOXC5Q00444 ZNF849P-201ENST00000594711 1566 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC5Q00444 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC5Q00444 SNORA64-201ENST00000384674 134 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AL513475.1-201ENST00000406602 315 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AL357078.2-201ENST00000416486 427 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 TAAR7P-201ENST00000436141 242 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 MTCO3P43-201ENST00000440974 771 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 FGF7P5-201ENST00000441829 291 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 IPO7P1-201ENST00000442031 636 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 VN1R10P-201ENST00000447106 875 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 COX6CP18-201ENST00000448769 222 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 EEF1B2P7-201ENST00000451177 676 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 MTND2P3-201ENST00000452458 470 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 MTCO3P11-201ENST00000455103 774 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC5Q00444 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC5Q00444 MTCYBP17-201ENST00000503579 789 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC5Q00444 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.89□□□□□ -2.11
HOXC5Q00444 TRAV28-201ENST00000557548 323 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AC026464.5-201ENST00000562497 722 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 MTATP6P25-201ENST00000574491 261 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 RPS3AP23-202ENST00000574601 686 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 OR4K7P-201ENST00000580232 945 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.89□□□□□ -2.11
HOXC5Q00444 AL121917.1-203ENST00000605534 577 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AP005137.2-201ENST00000609238 400 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AC079395.3-201ENST00000615161 484 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.89□□□□□ -2.11
HOXC5Q00444 SDAD1P2-201ENST00000441308 2028 ntBASIC1.89□□□□□ -2.11
HOXC5Q00444 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HOXC5Q00444 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
HOXC5Q00444 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms