Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CX3CL1P78423 RN7SKP285-201ENST00000410137 318 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 Z85995.1-201ENST00000415547 335 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC245054.1-201ENST00000420944 258 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 RPL7P2-201ENST00000427639 268 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC093106.2-201ENST00000428212 385 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 TAAR7P-201ENST00000436141 242 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CL1P78423 RPL23AP14-201ENST00000468281 468 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC084198.1-201ENST00000477747 402 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 TRBV12-2-201ENST00000489763 344 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 RNU6-1092P-201ENST00000516955 87 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 RPL21P12-201ENST00000559810 515 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AL845331.3-202ENST00000562856 261 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.02□□□□□ -1.93
CX3CL1P78423 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CL1P78423 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CL1P78423 AC002545.1-201ENST00000592511 181 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AL137849.1-201ENST00000604767 169 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC087241.4-201ENST00000612441 480 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC068831.8-201ENST00000620171 435 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 FP236240.3-201ENST00000623061 327 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 FRG1KP-201ENST00000623592 341 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC098679.4-201ENST00000624241 654 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC091905.1-201ENST00000624400 311 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 AC084035.1-201ENST00000634543 607 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CX3CL1P78423 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CL1P78423 AC090740.1-201ENST00000623193 2262 ntBASIC3.02□□□□□ -1.93
CX3CL1P78423 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CX3CL1P78423 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CL1P78423 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CL1P78423 Y_RNA.22-201ENST00000362492 102 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RNU6-181P-201ENST00000363225 107 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RNU6-188P-201ENST00000364207 107 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RNA5SP515-201ENST00000364570 118 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RN7SKP226-201ENST00000364912 300 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 SMIM11P1-201ENST00000369586 178 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 MIR558-201ENST00000384920 94 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 MIR184-201ENST00000384962 84 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RNU6-1197P-201ENST00000391183 107 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CL1P78423 AL391417.1-201ENST00000404100 426 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 ZNF90P2-204ENST00000419323 1075 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RAC1P6-201ENST00000423911 575 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 MTCO2P11-201ENST00000431069 680 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.01□□□□□ -1.93
CX3CL1P78423 HMGB3P12-201ENST00000438745 556 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 DNAJC19P4-201ENST00000440115 345 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 RPS29P31-201ENST00000446147 164 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.01□□□□□ -1.93
CX3CL1P78423 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.01□□□□□ -1.93
CX3CL1P78423 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
CX3CL1P78423 RPL23AP62-201ENST00000463396 453 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
CX3CL1P78423 AC108078.1-201ENST00000508073 725 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 RAC1P2-201ENST00000511164 579 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 RNU6-445P-201ENST00000516949 107 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.01□□□□□ -1.93
CX3CL1P78423 AP006587.4-201ENST00000526053 529 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 CASP1P1-201ENST00000526345 212 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AP003072.2-201ENST00000527756 676 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CL1P78423 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CL1P78423 RPS3AP4-201ENST00000555161 764 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC067852.3-201ENST00000589177 561 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 VN1R85P-201ENST00000601587 426 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC146944.4-201ENST00000602697 718 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.6-201ENST00000603753 252 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.11-201ENST00000604059 253 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL022154.1-201ENST00000604698 785 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC008162.1-201ENST00000604718 254 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.1-201ENST00000604752 252 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.5-201ENST00000605253 252 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.12-201ENST00000605291 253 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.8-201ENST00000605353 252 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC007619.2-201ENST00000605743 379 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL670379.7-201ENST00000605823 252 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 RMST_8.1-201ENST00000610287 165 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL390240.1-201ENST00000612950 384 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AL589994.2-201ENST00000621124 579 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC138649.3-201ENST00000622154 254 ntBASIC3.01□□□□□ -1.93
CX3CL1P78423 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CL1P78423 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.01□□□□□ -1.93
CX3CL1P78423 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CL1P78423 AC002546.1-201ENST00000588041 2504 ntBASIC3□□□□□ -1.93
CX3CL1P78423 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3□□□□□ -1.93
CX3CL1P78423 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3□□□□□ -1.93
CX3CL1P78423 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms