Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC133963.2-201ENST00000513686 578 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.5□□□□□ -2.17
UBA52P62987 AC074029.2-201ENST00000551045 634 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AC022662.1-201ENST00000580252 331 ntBASIC1.5□□□□□ -2.17
UBA52P62987 MIR3683-201ENST00000580847 82 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AC012254.4-201ENST00000588843 273 ntBASIC1.5□□□□□ -2.17
UBA52P62987 VN1R80P-201ENST00000597126 338 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AC068790.3-201ENST00000602988 553 ntBASIC1.5□□□□□ -2.17
UBA52P62987 MTCO2P22-201ENST00000603246 681 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AP005137.2-201ENST00000609238 400 ntBASIC1.5□□□□□ -2.17
UBA52P62987 OR10AB1P-201ENST00000609613 938 ntBASIC1.5□□□□□ -2.17
UBA52P62987 AC010872.1-201ENST00000624225 675 ntBASIC1.5□□□□□ -2.17
UBA52P62987 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
UBA52P62987 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.5□□□□□ -2.17
UBA52P62987 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UBA52P62987 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
UBA52P62987 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.49□□□□□ -2.17
UBA52P62987 AC123912.3-201ENST00000600907 1367 ntBASIC1.49□□□□□ -2.17
UBA52P62987 RNU1-105P-201ENST00000363470 161 ntBASIC1.49□□□□□ -2.17
UBA52P62987 RNU6-457P-201ENST00000363999 107 ntBASIC1.49□□□□□ -2.17
UBA52P62987 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
UBA52P62987 RNU2-20P-201ENST00000410425 191 ntBASIC1.49□□□□□ -2.17
UBA52P62987 SEPT2P1-201ENST00000419651 180 ntBASIC1.49□□□□□ -2.17
UBA52P62987 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.49□□□□□ -2.17
UBA52P62987 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.49□□□□□ -2.17
UBA52P62987 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC1.49□□□□□ -2.17
UBA52P62987 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.49□□□□□ -2.17
UBA52P62987 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.49□□□□□ -2.17
UBA52P62987 AC055731.1-201ENST00000474387 401 ntBASIC1.49□□□□□ -2.17
UBA52P62987 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.49□□□□□ -2.17
UBA52P62987 HMGB1P47-201ENST00000511281 589 ntBASIC1.49□□□□□ -2.17
UBA52P62987 AC007375.1-201ENST00000554513 578 ntBASIC1.49□□□□□ -2.17
UBA52P62987 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.49□□□□□ -2.17
UBA52P62987 AL009028.1-201ENST00000604895 802 ntBASIC1.49□□□□□ -2.17
UBA52P62987 AC079395.3-201ENST00000615161 484 ntBASIC1.49□□□□□ -2.17
UBA52P62987 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.49□□□□□ -2.17
UBA52P62987 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBA52P62987 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC1.48□□□□□ -2.17
UBA52P62987 MIR337-201ENST00000362281 93 ntBASIC1.48□□□□□ -2.17
UBA52P62987 RNU5D-1-201ENST00000363299 116 ntBASIC1.48□□□□□ -2.17
UBA52P62987 RNU6-1251P-201ENST00000364502 107 ntBASIC1.48□□□□□ -2.17
UBA52P62987 U3.29-201ENST00000391296 212 ntBASIC1.48□□□□□ -2.17
UBA52P62987 RPL7P27-201ENST00000403775 720 ntBASIC1.48□□□□□ -2.17
UBA52P62987 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBA52P62987 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.48□□□□□ -2.17
UBA52P62987 RPL23AP76-201ENST00000441860 458 ntBASIC1.48□□□□□ -2.17
UBA52P62987 XKRY2-201ENST00000442362 1093 ntBASIC1.48□□□□□ -2.17
UBA52P62987 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBA52P62987 PMCHL2-203ENST00000457791 237 ntBASIC1.48□□□□□ -2.17
UBA52P62987 AC007182.2-201ENST00000489251 402 ntBASIC1.48□□□□□ -2.17
UBA52P62987 AC020699.1-201ENST00000505161 445 ntBASIC1.48□□□□□ -2.17
UBA52P62987 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.48□□□□□ -2.17
UBA52P62987 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC1.48□□□□□ -2.17
UBA52P62987 AC108157.1-201ENST00000510511 539 ntBASIC1.48□□□□□ -2.17
UBA52P62987 RNU6-319P-201ENST00000516025 108 ntBASIC1.48□□□□□ -2.17
UBA52P62987 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.48□□□□□ -2.17
UBA52P62987 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.48□□□□□ -2.17
UBA52P62987 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.48□□□□□ -2.17
UBA52P62987 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.48□□□□□ -2.17
UBA52P62987 MIR3609-201ENST00000582661 80 ntBASIC1.48□□□□□ -2.17
UBA52P62987 AL450336.1-201ENST00000605180 586 ntBASIC1.48□□□□□ -2.17
UBA52P62987 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.48□□□□□ -2.17
UBA52P62987 CCT4P2-201ENST00000233836 1548 ntBASIC1.47□□□□□ -2.17
UBA52P62987 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
UBA52P62987 MIR9-3-201ENST00000385084 90 ntBASIC1.47□□□□□ -2.17
UBA52P62987 U8.14-201ENST00000390843 143 ntBASIC1.47□□□□□ -2.17
UBA52P62987 MIR1287-201ENST00000408492 90 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.47□□□□□ -2.17
UBA52P62987 XKRYP1-201ENST00000423438 492 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AL353729.1-201ENST00000425044 720 ntBASIC1.47□□□□□ -2.17
UBA52P62987 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC1.47□□□□□ -2.17
UBA52P62987 XKRYP2-201ENST00000432915 492 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AC093155.1-201ENST00000440164 826 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.47□□□□□ -2.17
UBA52P62987 MTATP6P7-201ENST00000453315 681 ntBASIC1.47□□□□□ -2.17
UBA52P62987 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UBA52P62987 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.47□□□□□ -2.17
UBA52P62987 AC117532.1-201ENST00000514638 323 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.47□□□□□ -2.17
UBA52P62987 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.47□□□□□ -2.17
UBA52P62987 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.47□□□□□ -2.17
UBA52P62987 RPP40P2-201ENST00000603596 712 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AL355297.2-201ENST00000604792 129 ntBASIC1.47□□□□□ -2.17
UBA52P62987 MIR8081-201ENST00000611533 95 ntBASIC1.47□□□□□ -2.17
UBA52P62987 AL449363.1-201ENST00000617815 186 ntBASIC1.47□□□□□ -2.17
UBA52P62987 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
UBA52P62987 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
UBA52P62987 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
UBA52P62987 U8.10-201ENST00000384260 133 ntBASIC1.46□□□□□ -2.18
UBA52P62987 SNORD65-201ENST00000391079 73 ntBASIC1.46□□□□□ -2.18
UBA52P62987 NPM1P10-201ENST00000398310 865 ntBASIC1.46□□□□□ -2.18
UBA52P62987 RNA5SP270-201ENST00000411361 118 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC1.46□□□□□ -2.18
UBA52P62987 BTF3P4-201ENST00000418852 495 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AL358075.3-201ENST00000426289 226 ntBASIC1.46□□□□□ -2.18
UBA52P62987 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.46□□□□□ -2.18
UBA52P62987 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.46□□□□□ -2.18
UBA52P62987 AL163540.1-201ENST00000485382 386 ntBASIC1.46□□□□□ -2.18
UBA52P62987 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.46□□□□□ -2.18
UBA52P62987 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms