Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RPL30P4-201ENST00000429309 333 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.64□□□□□ -2.31
RPL39P62891 snoU109.1-201ENST00000459339 135 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC0.64□□□□□ -2.31
RPL39P62891 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.64□□□□□ -2.31
RPL39P62891 RNU2-19P-201ENST00000517288 84 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AP005660.1-201ENST00000522972 293 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC0.64□□□□□ -2.31
RPL39P62891 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.64□□□□□ -2.31
RPL39P62891 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC0.64□□□□□ -2.31
RPL39P62891 AC013244.2-201ENST00000603396 103 ntBASIC0.64□□□□□ -2.31
RPL39P62891 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.64□□□□□ -2.31
RPL39P62891 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.64□□□□□ -2.31
RPL39P62891 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.64□□□□□ -2.31
RPL39P62891 AP003476.1-201ENST00000623984 516 ntBASIC0.64□□□□□ -2.31
RPL39P62891 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC0.64□□□□□ -2.31
RPL39P62891 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC0.64□□□□□ -2.31
RPL39P62891 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC0.64□□□□□ -2.31
RPL39P62891 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RPL39P62891 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.64□□□□□ -2.31
RPL39P62891 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
RPL39P62891 AC008555.8-201ENST00000623602 2168 ntBASIC0.63□□□□□ -2.31
RPL39P62891 BTF3L4P2-201ENST00000392798 346 ntBASIC0.63□□□□□ -2.31
RPL39P62891 MIR934-201ENST00000401241 83 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AP1B1P2-201ENST00000416196 106 ntBASIC0.63□□□□□ -2.31
RPL39P62891 ARL2BPP3-201ENST00000421226 480 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AL606495.1-201ENST00000422100 813 ntBASIC0.63□□□□□ -2.31
RPL39P62891 NDUFB4P6-201ENST00000436819 366 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AL353689.1-201ENST00000438895 199 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.63□□□□□ -2.31
RPL39P62891 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.63□□□□□ -2.31
RPL39P62891 AC004022.1-201ENST00000447766 1066 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC0.63□□□□□ -2.31
RPL39P62891 NAP1L1P3-201ENST00000462291 880 ntBASIC0.63□□□□□ -2.31
RPL39P62891 RPL39P28-201ENST00000465655 155 ntBASIC0.63□□□□□ -2.31
RPL39P62891 OR2A41P-201ENST00000473586 105 ntBASIC0.63□□□□□ -2.31
RPL39P62891 NDUFB4P2-201ENST00000509515 391 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.63□□□□□ -2.31
RPL39P62891 RPL23AP94-201ENST00000512518 302 ntBASIC0.63□□□□□ -2.31
RPL39P62891 CA1-215ENST00000522389 551 ntTSL 3 BASIC0.63□□□□□ -2.31
RPL39P62891 CIR1P1-201ENST00000524055 1133 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AC087441.2-201ENST00000529141 262 ntBASIC0.63□□□□□ -2.31
RPL39P62891 RRN3P3-201ENST00000549207 578 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.63□□□□□ -2.31
RPL39P62891 RPS3AP4-201ENST00000555161 764 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.63□□□□□ -2.31
RPL39P62891 OR4G1P-201ENST00000588632 938 ntBASIC0.63□□□□□ -2.31
RPL39P62891 MIR6078-201ENST00000611069 100 ntBASIC0.63□□□□□ -2.31
RPL39P62891 AL354950.1-201ENST00000614150 568 ntBASIC0.63□□□□□ -2.31
RPL39P62891 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.63□□□□□ -2.31
RPL39P62891 AP003485.1-201ENST00000625093 753 ntBASIC0.63□□□□□ -2.31
RPL39P62891 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
RPL39P62891 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
RPL39P62891 AL513475.1-201ENST00000406602 315 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC022022.1-201ENST00000430304 178 ntBASIC0.62□□□□□ -2.31
RPL39P62891 UBE2V1P6-201ENST00000430840 422 ntBASIC0.62□□□□□ -2.31
RPL39P62891 RPL39P29-201ENST00000447779 157 ntBASIC0.62□□□□□ -2.31
RPL39P62891 RPS24P6-201ENST00000452670 400 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC069277.2-201ENST00000454211 432 ntBASIC0.62□□□□□ -2.31
RPL39P62891 ANKRD26P4-201ENST00000455755 950 ntBASIC0.62□□□□□ -2.31
RPL39P62891 HMGN2P23-201ENST00000456759 269 ntBASIC0.62□□□□□ -2.31
RPL39P62891 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC0.62□□□□□ -2.31
RPL39P62891 RPS27P26-201ENST00000494583 239 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL39P62891 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.62□□□□□ -2.31
RPL39P62891 RNA5SP165-201ENST00000517142 115 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.62□□□□□ -2.31
RPL39P62891 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RPL39P62891 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.62□□□□□ -2.31
RPL39P62891 CBX3P8-201ENST00000532412 525 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.62□□□□□ -2.31
RPL39P62891 AC079148.1-201ENST00000565944 819 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC023824.2-201ENST00000566185 400 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AC078899.2-201ENST00000595282 212 ntBASIC0.62□□□□□ -2.31
RPL39P62891 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.62□□□□□ -2.31
RPL39P62891 AC106791.2-201ENST00000604680 391 ntBASIC0.62□□□□□ -2.31
RPL39P62891 AL136363.1-201ENST00000605349 337 ntBASIC0.62□□□□□ -2.31
RPL39P62891 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
RPL39P62891 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC0.61□□□□□ -2.31
RPL39P62891 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC0.61□□□□□ -2.31
RPL39P62891 CCT4P2-201ENST00000233836 1548 ntBASIC0.61□□□□□ -2.31
RPL39P62891 SNORD114-2-201ENST00000363953 78 ntBASIC0.61□□□□□ -2.31
RPL39P62891 TOMM22P2-201ENST00000430735 237 ntBASIC0.61□□□□□ -2.31
RPL39P62891 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.61□□□□□ -2.31
RPL39P62891 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL39P62891 RPL23AP3-201ENST00000453844 468 ntBASIC0.61□□□□□ -2.31
RPL39P62891 AL031183.1-201ENST00000457667 207 ntBASIC0.61□□□□□ -2.31
RPL39P62891 AC139453.3-201ENST00000493276 369 ntBASIC0.61□□□□□ -2.31
RPL39P62891 AC023050.1-201ENST00000498198 304 ntBASIC0.61□□□□□ -2.31
RPL39P62891 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RPL39P62891 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL39P62891 OR5B19P-201ENST00000531766 928 ntBASIC0.61□□□□□ -2.31
RPL39P62891 SUB1P3-201ENST00000564581 315 ntBASIC0.61□□□□□ -2.31
RPL39P62891 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC0.61□□□□□ -2.31
RPL39P62891 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.61□□□□□ -2.31
RPL39P62891 VPS8-228ENST00000628962 207 ntTSL 5 BASIC0.61□□□□□ -2.31
RPL39P62891 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.61□□□□□ -2.31
RPL39P62891 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.6□□□□□ -2.31
RPL39P62891 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
RPL39P62891 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 161.4 ms