Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.2□□□□□ -2.22
RPS28P62857 AP001429.1-201ENST00000602568 530 ntBASIC1.2□□□□□ -2.22
RPS28P62857 AC133644.2-201ENST00000608142 540 ntBASIC1.2□□□□□ -2.22
RPS28P62857 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.2□□□□□ -2.22
RPS28P62857 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.2□□□□□ -2.22
RPS28P62857 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.2□□□□□ -2.22
RPS28P62857 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPS28P62857 SGO1P1-201ENST00000603525 1447 ntBASIC1.2□□□□□ -2.22
RPS28P62857 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.2□□□□□ -2.22
RPS28P62857 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
RPS28P62857 AL356292.1-201ENST00000283110 373 ntBASIC1.19□□□□□ -2.22
RPS28P62857 AL356057.3-201ENST00000402607 340 ntBASIC1.19□□□□□ -2.22
RPS28P62857 ATP5A1P2-201ENST00000412323 255 ntBASIC1.19□□□□□ -2.22
RPS28P62857 KRR1P1-201ENST00000419430 803 ntBASIC1.19□□□□□ -2.22
RPS28P62857 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS28P62857 PPP1R11P2-201ENST00000423543 382 ntBASIC1.19□□□□□ -2.22
RPS28P62857 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
RPS28P62857 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS28P62857 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS28P62857 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.19□□□□□ -2.22
RPS28P62857 MTCO1P53-201ENST00000441633 699 ntBASIC1.19□□□□□ -2.22
RPS28P62857 AC112653.1-201ENST00000443851 386 ntBASIC1.19□□□□□ -2.22
RPS28P62857 RPL37P4-201ENST00000448908 268 ntBASIC1.19□□□□□ -2.22
RPS28P62857 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS28P62857 AC008379.1-201ENST00000463655 464 ntBASIC1.19□□□□□ -2.22
RPS28P62857 AC098862.1-201ENST00000504991 413 ntBASIC1.19□□□□□ -2.22
RPS28P62857 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.19□□□□□ -2.22
RPS28P62857 RNU6ATAC24P-201ENST00000516811 135 ntBASIC1.19□□□□□ -2.22
RPS28P62857 SNORD19.2-201ENST00000516978 73 ntBASIC1.19□□□□□ -2.22
RPS28P62857 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC1.19□□□□□ -2.22
RPS28P62857 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS28P62857 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.19□□□□□ -2.22
RPS28P62857 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPS28P62857 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.19□□□□□ -2.22
RPS28P62857 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RPS28P62857 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC1.19□□□□□ -2.22
RPS28P62857 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.19□□□□□ -2.22
RPS28P62857 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC1.19□□□□□ -2.22
RPS28P62857 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC1.19□□□□□ -2.22
RPS28P62857 AP001485.1-201ENST00000604799 199 ntBASIC1.19□□□□□ -2.22
RPS28P62857 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.19□□□□□ -2.22
RPS28P62857 MLECP1-201ENST00000615893 709 ntBASIC1.19□□□□□ -2.22
RPS28P62857 MTND1P37-201ENST00000636562 264 ntBASIC1.19□□□□□ -2.22
RPS28P62857 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
RPS28P62857 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
RPS28P62857 RNA5SP447-201ENST00000363749 119 ntBASIC1.18□□□□□ -2.22
RPS28P62857 RNA5SP130-201ENST00000364431 114 ntBASIC1.18□□□□□ -2.22
RPS28P62857 RN7SKP15-201ENST00000364742 309 ntBASIC1.18□□□□□ -2.22
RPS28P62857 RNU6-338P-201ENST00000383888 105 ntBASIC1.18□□□□□ -2.22
RPS28P62857 MIR16-1-201ENST00000385271 89 ntBASIC1.18□□□□□ -2.22
RPS28P62857 SNORA48.5-201ENST00000391143 135 ntBASIC1.18□□□□□ -2.22
RPS28P62857 TRIM60P5Y-201ENST00000413946 574 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.18□□□□□ -2.22
RPS28P62857 AC079355.1-201ENST00000421770 223 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC1.18□□□□□ -2.22
RPS28P62857 MTCO3P46-201ENST00000425787 232 ntBASIC1.18□□□□□ -2.22
RPS28P62857 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.18□□□□□ -2.22
RPS28P62857 HMGB1P18-201ENST00000438801 619 ntBASIC1.18□□□□□ -2.22
RPS28P62857 CBX1P1-201ENST00000440184 427 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.18□□□□□ -2.22
RPS28P62857 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.18□□□□□ -2.22
RPS28P62857 AC002381.1-201ENST00000447049 280 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC1.18□□□□□ -2.22
RPS28P62857 AP001324.2-201ENST00000461163 319 ntBASIC1.18□□□□□ -2.22
RPS28P62857 RN7SL132P-201ENST00000478131 296 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.18□□□□□ -2.22
RPS28P62857 AC048346.1-201ENST00000510247 144 ntBASIC1.18□□□□□ -2.22
RPS28P62857 RNU6-352P-201ENST00000516908 107 ntBASIC1.18□□□□□ -2.22
RPS28P62857 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.18□□□□□ -2.22
RPS28P62857 NACAP3-201ENST00000552100 481 ntBASIC1.18□□□□□ -2.22
RPS28P62857 GTF3AP2-201ENST00000557014 266 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.18□□□□□ -2.22
RPS28P62857 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC1.18□□□□□ -2.22
RPS28P62857 AC093519.1-201ENST00000566109 298 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.18□□□□□ -2.22
RPS28P62857 AC018638.7-201ENST00000605836 1114 ntBASIC1.18□□□□□ -2.22
RPS28P62857 MIR6766-201ENST00000622641 72 ntBASIC1.18□□□□□ -2.22
RPS28P62857 AC093591.3-201ENST00000634516 308 ntBASIC1.18□□□□□ -2.22
RPS28P62857 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RPS28P62857 MTCO1P9-201ENST00000505577 1534 ntBASIC1.18□□□□□ -2.22
RPS28P62857 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
RPS28P62857 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
RPS28P62857 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
RPS28P62857 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC1.17□□□□□ -2.22
RPS28P62857 MTND5P11-201ENST00000511037 1812 ntBASIC1.17□□□□□ -2.22
RPS28P62857 MIR424-201ENST00000362227 98 ntBASIC1.17□□□□□ -2.22
RPS28P62857 SNORA25B-201ENST00000365507 128 ntBASIC1.17□□□□□ -2.22
RPS28P62857 BTF3L4P2-201ENST00000392798 346 ntBASIC1.17□□□□□ -2.22
RPS28P62857 RPL32P23-201ENST00000397237 405 ntBASIC1.17□□□□□ -2.22
RPS28P62857 RPL21P65-201ENST00000406094 466 ntBASIC1.17□□□□□ -2.22
RPS28P62857 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.17□□□□□ -2.22
RPS28P62857 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.17□□□□□ -2.22
RPS28P62857 RPS20P5-201ENST00000434808 360 ntBASIC1.17□□□□□ -2.22
RPS28P62857 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.17□□□□□ -2.22
RPS28P62857 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.17□□□□□ -2.22
RPS28P62857 AL050341.1-201ENST00000447743 313 ntBASIC1.17□□□□□ -2.22
RPS28P62857 RPS29P23-201ENST00000458635 123 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC093663.2-201ENST00000484625 313 ntBASIC1.17□□□□□ -2.22
RPS28P62857 AC091167.1-201ENST00000492017 396 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms