Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC108479.2-201ENST00000617314 601 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC009268.2-201ENST00000621925 457 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AL353748.2-201ENST00000622148 471 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AP003355.3-201ENST00000623465 114 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 AC093010.3-201ENST00000570269 15214 ntBASIC3.69□□□□□ -1.82
HDAC4P56524 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
HDAC4P56524 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.69□□□□□ -1.82
HDAC4P56524 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
HDAC4P56524 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC007256.1-201ENST00000392253 2765 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 MIR135A2-201ENST00000384854 100 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 RNU4-65P-201ENST00000410473 140 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AC233728.2-201ENST00000425348 757 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 MTND1P27-201ENST00000451117 902 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC007967.1-201ENST00000455422 1159 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 SNORD105B-201ENST00000458770 79 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 RPL7P23-201ENST00000493874 747 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AC020893.1-201ENST00000502452 580 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.68□□□□□ -1.82
HDAC4P56524 NDUFB4P2-201ENST00000509515 391 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AC105914.1-201ENST00000511798 226 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC026801.2-201ENST00000515352 425 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 RN7SKP60-201ENST00000516985 239 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HDAC4P56524 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC037471.2-201ENST00000564941 598 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HDAC4P56524 MIR3118-1-201ENST00000581787 76 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC068790.3-201ENST00000602988 553 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC010591.1-201ENST00000603941 649 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.68□□□□□ -1.82
HDAC4P56524 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC008498.1-201ENST00000613012 531 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AP001506.1-201ENST00000615444 211 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
HDAC4P56524 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 AF117829.1-206ENST00000621883 3802 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.68□□□□□ -1.82
HDAC4P56524 AC244258.1-201ENST00000637553 1071 ntBASIC3.68□□□□□ -1.82
HDAC4P56524 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
HDAC4P56524 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
HDAC4P56524 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
HDAC4P56524 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
HDAC4P56524 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 FRG1CP-201ENST00000358464 769 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 RNU4-1-201ENST00000363925 141 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 RNA5SP72-201ENST00000364442 117 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
HDAC4P56524 NDUFB4P4-201ENST00000404822 243 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.67□□□□□ -1.82
HDAC4P56524 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 HMGB3P23-201ENST00000414981 585 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC3.67□□□□□ -1.82
HDAC4P56524 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 OR4K11P-201ENST00000431829 904 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 DNAJC19P4-201ENST00000440115 345 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 ATP5C1P1-201ENST00000441945 895 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 NANOGNBP1-201ENST00000448444 480 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 MTND1P3-201ENST00000484956 952 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 FCF1P3-201ENST00000496394 590 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 CDC42P4-201ENST00000510507 563 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.67□□□□□ -1.82
HDAC4P56524 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 ARL2BPP6-201ENST00000512757 439 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 RNU1-61P-201ENST00000516107 151 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 RNU2-27P-201ENST00000516185 142 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 SNORA31.8-201ENST00000516327 108 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 RNU6-798P-201ENST00000516912 103 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC107934.1-201ENST00000522215 217 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 CCNG2P1-201ENST00000549521 1000 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 OR4H12P-201ENST00000556269 907 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.67□□□□□ -1.82
HDAC4P56524 AC006116.10-201ENST00000591836 581 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 AP001429.1-201ENST00000602568 530 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 DEFB131E-202ENST00000602581 683 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.67□□□□□ -1.82
HDAC4P56524 AL022099.1-201ENST00000604551 712 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 MIR6130-201ENST00000619419 109 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AC022149.2-201ENST00000621061 203 ntBASIC3.67□□□□□ -1.82
HDAC4P56524 AL359740.1-201ENST00000624340 592 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms