Protein–RNA interactions for Protein: P54278

PMS2, Mismatch repair endonuclease PMS2, humanhuman

Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS2P54278 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.72□□□□□ -1.81
PMS2P54278 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
PMS2P54278 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PMS2P54278 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PMS2P54278 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.72□□□□□ -1.81
PMS2P54278 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PMS2P54278 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.72□□□□□ -1.81
PMS2P54278 RNU6-1103P-201ENST00000384150 107 ntBASIC3.72□□□□□ -1.81
PMS2P54278 Y_RNA.554-201ENST00000384672 102 ntBASIC3.72□□□□□ -1.81
PMS2P54278 MIR30B-201ENST00000384850 88 ntBASIC3.72□□□□□ -1.81
PMS2P54278 CIR1P3-201ENST00000405137 479 ntBASIC3.72□□□□□ -1.81
PMS2P54278 GSTA9P-201ENST00000406231 611 ntBASIC3.72□□□□□ -1.81
PMS2P54278 FCF1P10-201ENST00000407590 479 ntBASIC3.72□□□□□ -1.81
PMS2P54278 Y_RNA.604-201ENST00000410574 102 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC078974.1-201ENST00000411597 223 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC022028.1-201ENST00000412054 408 ntBASIC3.72□□□□□ -1.81
PMS2P54278 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 RPL31P12-201ENST00000422587 358 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AL589872.1-201ENST00000426602 288 ntBASIC3.72□□□□□ -1.81
PMS2P54278 SETP5-201ENST00000437270 562 ntBASIC3.72□□□□□ -1.81
PMS2P54278 RPL22P17-201ENST00000438729 315 ntBASIC3.72□□□□□ -1.81
PMS2P54278 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 MTATP6P23-201ENST00000440153 476 ntBASIC3.72□□□□□ -1.81
PMS2P54278 RPS3AP46-201ENST00000448352 682 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.72□□□□□ -1.81
PMS2P54278 AP1S2P1-201ENST00000457344 379 ntBASIC3.72□□□□□ -1.81
PMS2P54278 VN1R17P-201ENST00000472048 1090 ntBASIC3.72□□□□□ -1.81
PMS2P54278 MTND1P3-201ENST00000484956 952 ntBASIC3.72□□□□□ -1.81
PMS2P54278 MLLT10P2-201ENST00000506434 249 ntBASIC3.72□□□□□ -1.81
PMS2P54278 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 Y_RNA.672-201ENST00000516289 104 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC103783.1-201ENST00000520506 373 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.72□□□□□ -1.81
PMS2P54278 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 DUXAP4-201ENST00000603046 613 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AP002360.4-201ENST00000606980 481 ntBASIC3.72□□□□□ -1.81
PMS2P54278 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.72□□□□□ -1.81
PMS2P54278 AC019176.2-201ENST00000611579 315 ntBASIC3.72□□□□□ -1.81
PMS2P54278 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.72□□□□□ -1.81
PMS2P54278 AC005344.1-201ENST00000613391 459 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC009159.1-201ENST00000618386 642 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC012314.7-201ENST00000619693 93 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC015967.1-201ENST00000619893 476 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AC022149.2-201ENST00000621061 203 ntBASIC3.72□□□□□ -1.81
PMS2P54278 AL360181.4-201ENST00000621752 134 ntBASIC3.72□□□□□ -1.81
PMS2P54278 FP236240.3-201ENST00000623061 327 ntBASIC3.72□□□□□ -1.81
PMS2P54278 MIR7153-201ENST00000637758 57 ntBASIC3.72□□□□□ -1.81
PMS2P54278 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
PMS2P54278 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PMS2P54278 MTND5P33-201ENST00000571250 1450 ntBASIC3.72□□□□□ -1.81
PMS2P54278 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.72□□□□□ -1.81
PMS2P54278 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
PMS2P54278 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
PMS2P54278 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.72□□□□□ -1.81
PMS2P54278 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.71□□□□□ -1.81
PMS2P54278 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.71□□□□□ -1.81
PMS2P54278 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
PMS2P54278 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.71□□□□□ -1.82
PMS2P54278 MFSD8-236ENST00000641509 4050 ntBASIC3.71□□□□□ -1.82
PMS2P54278 RNU6-853P-201ENST00000364306 107 ntBASIC3.71□□□□□ -1.82
PMS2P54278 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PMS2P54278 RNU6-1207P-201ENST00000384343 107 ntBASIC3.71□□□□□ -1.82
PMS2P54278 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
PMS2P54278 AC093578.1-201ENST00000415219 368 ntBASIC3.71□□□□□ -1.82
PMS2P54278 SPA17P1-201ENST00000416656 452 ntBASIC3.71□□□□□ -1.82
PMS2P54278 CCDC58P2-201ENST00000417131 366 ntBASIC3.71□□□□□ -1.82
PMS2P54278 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
PMS2P54278 DUTP6-201ENST00000425573 462 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.71□□□□□ -1.82
PMS2P54278 HMGB1P12-201ENST00000438594 598 ntBASIC3.71□□□□□ -1.82
PMS2P54278 MTND4P18-201ENST00000447010 465 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.71□□□□□ -1.82
PMS2P54278 MTCO3P38-201ENST00000468910 766 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
PMS2P54278 RPS4XP22-201ENST00000480755 780 ntBASIC3.71□□□□□ -1.82
PMS2P54278 RPS4XP13-201ENST00000483219 789 ntBASIC3.71□□□□□ -1.82
PMS2P54278 KLHL2P1-201ENST00000508691 521 ntBASIC3.71□□□□□ -1.82
PMS2P54278 RNU6-314P-201ENST00000516574 104 ntBASIC3.71□□□□□ -1.82
PMS2P54278 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.71□□□□□ -1.82
PMS2P54278 AL133241.1-201ENST00000556832 487 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.71□□□□□ -1.82
PMS2P54278 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.71□□□□□ -1.82
PMS2P54278 BX664608.1-201ENST00000610519 487 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AL158209.2-201ENST00000619266 216 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AC002550.2-201ENST00000621246 394 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AL732618.1-201ENST00000623251 301 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AC009093.8-201ENST00000641769 292 ntBASIC3.71□□□□□ -1.82
PMS2P54278 AP004289.2-201ENST00000444413 1457 ntBASIC3.71□□□□□ -1.82
PMS2P54278 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.7□□□□□ -1.82
PMS2P54278 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.7□□□□□ -1.82
PMS2P54278 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
PMS2P54278 GNG5P1-201ENST00000255500 204 ntBASIC3.7□□□□□ -1.82
PMS2P54278 Y_RNA.296-201ENST00000364930 108 ntBASIC3.7□□□□□ -1.82
PMS2P54278 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms