Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AC012181.1-201ENST00000479895 423 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AC068724.1-201ENST00000487100 792 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 RNA5SP216-201ENST00000516111 123 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 Y_RNA.695-201ENST00000516715 107 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 RNA5SP380-201ENST00000517190 98 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK2P53671 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.13□□□□□ -1.91
LIMK2P53671 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.13□□□□□ -1.91
LIMK2P53671 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.13□□□□□ -1.91
LIMK2P53671 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK2P53671 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.13□□□□□ -1.91
LIMK2P53671 AL391156.1-201ENST00000554965 554 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK2P53671 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK2P53671 AL353997.4-201ENST00000586196 166 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.13□□□□□ -1.91
LIMK2P53671 AC073544.2-201ENST00000601155 540 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AL022099.1-201ENST00000604551 712 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AC024560.3-201ENST00000608482 349 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.13□□□□□ -1.91
LIMK2P53671 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.13□□□□□ -1.91
LIMK2P53671 AC095031.1-201ENST00000623685 672 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AC092192.1-201ENST00000633154 1018 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 AC090582.1-201ENST00000636321 199 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.13□□□□□ -1.91
LIMK2P53671 MTND5P27-201ENST00000428871 1720 ntBASIC3.13□□□□□ -1.91
LIMK2P53671 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LIMK2P53671 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
LIMK2P53671 MIR422A-201ENST00000362286 90 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 Y_RNA.234-201ENST00000364409 97 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 Y_RNA.553-201ENST00000384670 102 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 MIR135A2-201ENST00000384854 100 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
LIMK2P53671 RPS15AP38-201ENST00000413110 372 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.12□□□□□ -1.91
LIMK2P53671 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.12□□□□□ -1.91
LIMK2P53671 RPL23AP35-201ENST00000451906 501 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 KATNBL1P6-201ENST00000453433 915 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC104563.1-201ENST00000476147 376 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC010265.1-201ENST00000513509 211 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC060788.1-201ENST00000521318 469 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.12□□□□□ -1.91
LIMK2P53671 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK2P53671 MIR4474-201ENST00000579189 78 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.12□□□□□ -1.91
LIMK2P53671 AC012443.1-201ENST00000605605 231 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC100793.4-201ENST00000613683 429 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC138932.5-201ENST00000617759 563 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC026585.1-201ENST00000619582 524 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC018692.3-201ENST00000623929 123 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC092656.1-203ENST00000624134 423 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
LIMK2P53671 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
LIMK2P53671 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
LIMK2P53671 TAB3P1-202ENST00000452645 1634 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 ZNF807-201ENST00000328088 1707 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
LIMK2P53671 AL161781.1-201ENST00000354277 403 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 U3.4-201ENST00000363352 213 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 Y_RNA.302-201ENST00000364997 102 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 Y_RNA.559-201ENST00000384686 107 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AL591034.1-201ENST00000407447 340 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 RPL23AP39-201ENST00000415533 405 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMK2P53671 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMK2P53671 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LIMK2P53671 MED14P1-201ENST00000430517 648 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK2P53671 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMK2P53671 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMK2P53671 AC108734.1-201ENST00000439549 399 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 RABEPKP1-201ENST00000440529 1026 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 TRIM60P18-201ENST00000441518 828 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 MTCO1P19-201ENST00000443487 500 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 EEF1E1P1-201ENST00000446998 430 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK2P53671 ZNF114P1-201ENST00000453500 292 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 SNORA59A-201ENST00000459326 152 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AP001486.1-201ENST00000463339 476 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AL049873.1-201ENST00000480540 376 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC011825.1-201ENST00000484967 388 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.11□□□□□ -1.91
LIMK2P53671 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
LIMK2P53671 AC024589.1-201ENST00000512207 263 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC091965.2-201ENST00000512324 613 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC017037.2-201ENST00000513850 890 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC022447.1-201ENST00000515358 464 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.11□□□□□ -1.91
LIMK2P53671 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
LIMK2P53671 AC103783.1-201ENST00000520506 373 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms