Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC138649.3-201ENST00000622154 254 ntBASIC3.66□□□□□ -1.82
PTPN9P43378 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.66□□□□□ -1.82
PTPN9P43378 OR5AK4P-201ENST00000635912 903 ntBASIC3.66□□□□□ -1.82
PTPN9P43378 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN9P43378 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PTPN9P43378 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.82
PTPN9P43378 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTPN9P43378 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTPN9P43378 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PTPN9P43378 RNU5E-8P-201ENST00000363502 116 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 RNU6-173P-201ENST00000364215 104 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 RNY3P13-201ENST00000365542 102 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN9P43378 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC127391.1-201ENST00000411737 98 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN9P43378 SSXP9-201ENST00000417503 292 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 PPP1R11P2-201ENST00000423543 382 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 USP9YP36-201ENST00000424581 829 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 OR2B8P-201ENST00000432841 938 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 AC104850.1-201ENST00000435940 476 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 AL357552.1-201ENST00000445254 415 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN9P43378 NANOGNBP1-201ENST00000448444 480 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN9P43378 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.65□□□□□ -1.83
PTPN9P43378 SRRM1P2-201ENST00000464531 1192 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 KLHL2P1-201ENST00000508691 521 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 PCBP2P3-201ENST00000509726 843 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 SAP18P1-201ENST00000512058 390 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 RNA5SP337-201ENST00000517007 109 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AC103843.2-201ENST00000530523 682 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 OR5D17P-201ENST00000531492 978 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.65□□□□□ -1.83
PTPN9P43378 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.65□□□□□ -1.83
PTPN9P43378 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN9P43378 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.65□□□□□ -1.83
PTPN9P43378 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.65□□□□□ -1.83
PTPN9P43378 AL133173.2-201ENST00000614270 90 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 AL034408.1-202ENST00000636088 415 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 U6.98-201ENST00000637157 84 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
PTPN9P43378 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN9P43378 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN9P43378 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
PTPN9P43378 AC009812.4-201ENST00000569134 1805 ntBASIC3.65□□□□□ -1.83
PTPN9P43378 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PTPN9P43378 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PTPN9P43378 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN9P43378 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN9P43378 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 U3.11-201ENST00000364476 212 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 Y_RNA.296-201ENST00000364930 108 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 SNORA62.3-201ENST00000365110 153 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 Y_RNA.516-201ENST00000384541 124 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN9P43378 RPS3AP36-201ENST00000398190 775 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 GSTA9P-201ENST00000406231 611 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 RN7SKP111-201ENST00000410349 271 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 RNU6-195P-201ENST00000411352 109 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 BX295541.1-201ENST00000417774 250 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 MTATP6P4-201ENST00000427725 675 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN9P43378 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN9P43378 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 RPL23AP14-201ENST00000468281 468 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PTPN9P43378 MLLT10P2-201ENST00000506434 249 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN9P43378 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN9P43378 AC010493.1-201ENST00000513479 292 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN9P43378 MTND1P5-201ENST00000517906 940 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 AC087883.1-201ENST00000551882 391 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 ZNF519P2-201ENST00000557032 169 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.64□□□□□ -1.83
PTPN9P43378 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.64□□□□□ -1.83
PTPN9P43378 MIR3167-201ENST00000579623 85 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AL606834.2-201ENST00000602954 668 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AC012443.1-201ENST00000605605 231 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.64□□□□□ -1.83
PTPN9P43378 AL161734.1-201ENST00000609720 557 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 TUG1_2.1-201ENST00000614234 87 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 AC026585.1-201ENST00000619582 524 ntBASIC3.64□□□□□ -1.83
PTPN9P43378 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms