Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 H3F3AP1-201ENST00000559984 334 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AL157394.1-201ENST00000562983 1224 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 UBL5P2-201ENST00000583788 219 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AP001429.1-201ENST00000602568 530 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AL158211.4-201ENST00000606988 584 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 AC087683.2-201ENST00000611384 326 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AL020991.1-201ENST00000612314 373 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AC140725.3-201ENST00000616193 880 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AC099506.2-201ENST00000623074 221 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 MIR622-201ENST00000638396 96 ntBASIC2.98□□□□□ -1.93
PTPN4P29074 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
PTPN4P29074 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
PTPN4P29074 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN4P29074 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PTPN4P29074 RNU5A-1-201ENST00000362698 116 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 RNU6-1207P-201ENST00000384343 107 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 SNORA44-201ENST00000384584 132 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PTPN4P29074 RPS3AP24-201ENST00000407896 734 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 MIR320C1-201ENST00000408566 88 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 MIR1289-1-201ENST00000408836 144 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN4P29074 RPL7L1P10-201ENST00000427790 463 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 AC092573.2-201ENST00000434546 243 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 RPL35AP22-201ENST00000436855 335 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC096576.1-201ENST00000489014 359 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 AP001025.2-201ENST00000490908 477 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC008885.1-201ENST00000514930 301 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN4P29074 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN4P29074 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN4P29074 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN4P29074 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.97□□□□□ -1.93
PTPN4P29074 AC078899.3-201ENST00000599065 212 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 AC009159.2-201ENST00000617603 606 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
PTPN4P29074 AP000526.1-201ENST00000603308 1388 ntBASIC2.97□□□□□ -1.93
PTPN4P29074 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
PTPN4P29074 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN4P29074 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN4P29074 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN4P29074 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 RNU6-223P-201ENST00000362830 107 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 RNU6-931P-201ENST00000363850 107 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 SNORA80A-201ENST00000363922 136 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 SNORA4.1-201ENST00000364263 144 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 Y_RNA.510-201ENST00000384511 114 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 PIGPP2-201ENST00000411569 458 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN4P29074 TXNL1P1-201ENST00000429528 554 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AC104332.2-201ENST00000429959 156 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN4P29074 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.96□□□□□ -1.94
PTPN4P29074 AC090774.1-201ENST00000435925 246 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 RPL21P2-201ENST00000440049 481 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AC112653.1-201ENST00000443851 386 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN4P29074 AC010099.1-201ENST00000455434 375 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 RPS27AP9-201ENST00000477681 438 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.96□□□□□ -1.94
PTPN4P29074 AC093809.1-201ENST00000509155 340 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.96□□□□□ -1.94
PTPN4P29074 AP000857.1-201ENST00000532151 543 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN4P29074 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN4P29074 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN4P29074 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.96□□□□□ -1.94
PTPN4P29074 AC004852.3-201ENST00000614131 326 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AL450472.3-201ENST00000615578 367 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 ATP5A1P2-202ENST00000616464 443 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 MIR6852-201ENST00000621699 66 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AP002791.1-201ENST00000623291 381 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AP000770.2-201ENST00000623694 100 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AC009039.2-201ENST00000624524 529 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 AC093010.3-201ENST00000570269 15214 ntBASIC2.96□□□□□ -1.94
PTPN4P29074 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
PTPN4P29074 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.96□□□□□ -1.94
PTPN4P29074 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN4P29074 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PTPN4P29074 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN4P29074 SNORA71.1-201ENST00000364523 117 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 RNU6-343P-201ENST00000364709 104 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN4P29074 RNU6-637P-201ENST00000384050 107 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 Y_RNA.500-201ENST00000384466 111 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 SNORD15B-201ENST00000384714 146 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AC119751.3-201ENST00000399720 670 ntBASIC2.95□□□□□ -1.94
PTPN4P29074 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.95□□□□□ -1.94
PTPN4P29074 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms