Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
POLR2AP24928 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
POLR2AP24928 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
POLR2AP24928 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
POLR2AP24928 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.13□□□□□ -1.75
POLR2AP24928 Y_RNA.394-201ENST00000383942 103 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
POLR2AP24928 RNU2-39P-201ENST00000410604 198 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.13□□□□□ -1.75
POLR2AP24928 BNIP3P2-201ENST00000441221 577 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.13□□□□□ -1.75
POLR2AP24928 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.13□□□□□ -1.75
POLR2AP24928 PPP1R2P5-201ENST00000457256 603 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 RPL38P4-201ENST00000502376 214 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.13□□□□□ -1.75
POLR2AP24928 RNA5SP401-201ENST00000515920 127 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.13□□□□□ -1.75
POLR2AP24928 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 MIR4742-201ENST00000581069 85 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.13□□□□□ -1.75
POLR2AP24928 AL353997.4-201ENST00000586196 166 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 KLKP1-201ENST00000595979 403 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AL162730.1-201ENST00000605734 292 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC004908.2-201ENST00000609090 574 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 AC009237.17-201ENST00000618111 748 ntBASIC4.13□□□□□ -1.75
POLR2AP24928 MAPK10-253ENST00000641010 4072 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
POLR2AP24928 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
POLR2AP24928 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.12□□□□□ -1.75
POLR2AP24928 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.12□□□□□ -1.75
POLR2AP24928 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
POLR2AP24928 NEAT1-202ENST00000501122 22743 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 Y_RNA.216-201ENST00000364205 93 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 RNU6-444P-201ENST00000383988 108 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 RNU6-767P-201ENST00000384132 107 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC4.12□□□□□ -1.75
POLR2AP24928 RNU2-9P-201ENST00000410194 145 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 COTL1P1-201ENST00000422309 375 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC233981.1-201ENST00000423224 461 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC006548.1-201ENST00000427470 102 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 RPS15AP9-201ENST00000439856 381 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 TRGVB-201ENST00000453257 471 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.12□□□□□ -1.75
POLR2AP24928 AC130509.1-201ENST00000464158 433 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC4.12□□□□□ -1.75
POLR2AP24928 AC108471.1-201ENST00000513977 287 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 SNORA48.10-201ENST00000516965 160 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.12□□□□□ -1.75
POLR2AP24928 AC123904.2-201ENST00000548059 300 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.12□□□□□ -1.75
POLR2AP24928 LARP7P2-201ENST00000575306 125 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC067852.3-201ENST00000589177 561 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 MIR98-201ENST00000606724 119 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 AC090971.5-201ENST00000621102 293 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 CR381572.1-201ENST00000625098 102 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.12□□□□□ -1.75
POLR2AP24928 SAGE2P-201ENST00000420011 2126 ntBASIC4.12□□□□□ -1.75
POLR2AP24928 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.12□□□□□ -1.75
POLR2AP24928 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
POLR2AP24928 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 Y_RNA.145-201ENST00000363527 102 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 SNORA75.4-201ENST00000391278 119 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AL354719.1-201ENST00000406535 843 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 MTND3P8-201ENST00000412909 339 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AC063979.1-201ENST00000415539 377 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AC007283.2-201ENST00000424739 197 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC079781.2-201ENST00000446424 169 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 Y_RNA.718-201ENST00000517110 102 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 RN7SKP256-201ENST00000517201 314 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.11□□□□□ -1.75
POLR2AP24928 MIR3118-1-201ENST00000581787 76 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 CYP2C61P-201ENST00000604072 290 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC018692.3-201ENST00000623929 123 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.11□□□□□ -1.75
POLR2AP24928 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
POLR2AP24928 OTUD4P1-201ENST00000237841 3067 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.11□□□□□ -1.75
POLR2AP24928 OR52B1P-201ENST00000316506 909 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 Y_RNA.67-201ENST00000362870 100 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 RNU6-1120P-201ENST00000362988 108 ntBASIC4.11□□□□□ -1.75
POLR2AP24928 Y_RNA.315-201ENST00000365117 102 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms