Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.79□□□□□ -1.96
XRCC1P18887 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
XRCC1P18887 RNU5A-1-201ENST00000362698 116 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 RNU6-931P-201ENST00000363850 107 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 RNU6-289P-201ENST00000364093 107 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 RNU4-28P-201ENST00000364739 141 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 RNU6-637P-201ENST00000384050 107 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 Y_RNA.510-201ENST00000384511 114 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 RN7SKP266-201ENST00000410232 287 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 ATG3P1-201ENST00000419507 911 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AL590383.1-201ENST00000428602 75 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 MTND1P32-201ENST00000433043 938 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.79□□□□□ -1.96
XRCC1P18887 NDUFB4P6-201ENST00000436819 366 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 RPS24P13-201ENST00000442520 397 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.79□□□□□ -1.96
XRCC1P18887 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.79□□□□□ -1.96
XRCC1P18887 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.79□□□□□ -1.96
XRCC1P18887 HSPE1P6-201ENST00000479457 291 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC103975.1-201ENST00000482506 483 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AP001025.2-201ENST00000490908 477 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC034222.1-201ENST00000494052 532 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.79□□□□□ -1.96
XRCC1P18887 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.79□□□□□ -1.96
XRCC1P18887 AC093809.1-201ENST00000509155 340 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
XRCC1P18887 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.79□□□□□ -1.96
XRCC1P18887 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.79□□□□□ -1.96
XRCC1P18887 RNU6-415P-201ENST00000516252 97 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 SNORA31.22-201ENST00000517204 135 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.79□□□□□ -1.96
XRCC1P18887 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.79□□□□□ -1.96
XRCC1P18887 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.79□□□□□ -1.96
XRCC1P18887 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.79□□□□□ -1.96
XRCC1P18887 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.79□□□□□ -1.96
XRCC1P18887 DUXAP4-201ENST00000603046 613 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC004067.1-201ENST00000608733 700 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC090115.4-201ENST00000609970 188 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC2.79□□□□□ -1.96
XRCC1P18887 AC010338.1-201ENST00000621823 717 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC079597.1-201ENST00000624306 508 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AP000676.4-201ENST00000624659 623 ntBASIC2.79□□□□□ -1.96
XRCC1P18887 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.79□□□□□ -1.96
XRCC1P18887 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
XRCC1P18887 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.78□□□□□ -1.96
XRCC1P18887 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
XRCC1P18887 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.78□□□□□ -1.96
XRCC1P18887 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
XRCC1P18887 RNU6-1197P-201ENST00000391183 107 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 RNA5SP38-201ENST00000410750 119 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.78□□□□□ -1.96
XRCC1P18887 NDUFB4P7-201ENST00000423198 363 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.78□□□□□ -1.96
XRCC1P18887 AL035407.1-201ENST00000429211 571 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC2.78□□□□□ -1.96
XRCC1P18887 AC105272.1-201ENST00000438604 198 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.78□□□□□ -1.96
XRCC1P18887 RPL23AP35-201ENST00000451906 501 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 NIPA2P5-201ENST00000452282 464 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AC104472.2-201ENST00000469035 601 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 RPL31P60-201ENST00000478450 367 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AHI1-208ENST00000488690 712 ntTSL 5 BASIC2.78□□□□□ -1.96
XRCC1P18887 RPL30P5-201ENST00000494923 336 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.78□□□□□ -1.96
XRCC1P18887 AC117522.3-201ENST00000507974 584 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AC091826.1-201ENST00000514065 313 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.78□□□□□ -1.96
XRCC1P18887 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
XRCC1P18887 ELOCP31-201ENST00000540463 467 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.78□□□□□ -1.96
XRCC1P18887 AC125611.2-201ENST00000551907 647 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.78□□□□□ -1.96
XRCC1P18887 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
XRCC1P18887 GTF3AP2-201ENST00000557014 266 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.78□□□□□ -1.96
XRCC1P18887 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.78□□□□□ -1.96
XRCC1P18887 AC008443.7-201ENST00000622195 246 ntBASIC2.78□□□□□ -1.96
XRCC1P18887 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
XRCC1P18887 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.78□□□□□ -1.96
XRCC1P18887 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
XRCC1P18887 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
XRCC1P18887 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.78□□□□□ -1.97
XRCC1P18887 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 SNORA5B-201ENST00000363786 132 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 SNORA18.3-201ENST00000384122 132 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 Y_RNA.548-201ENST00000384656 105 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 U3.20-201ENST00000390909 217 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RNU6-754P-201ENST00000391166 107 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL21P75-201ENST00000396599 483 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL21P28-201ENST00000401418 483 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AL592114.1-201ENST00000403842 483 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
XRCC1P18887 MTCO1P17-201ENST00000411522 491 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 PIGPP2-201ENST00000411569 458 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPS24P7-201ENST00000416921 246 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 RPL22P18-201ENST00000417197 377 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.77□□□□□ -1.97
XRCC1P18887 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.77□□□□□ -1.97
XRCC1P18887 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms