Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 Y_RNA.132-201ENST00000363421 102 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 Y_RNA.395-201ENST00000383945 109 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 RNU6-738P-201ENST00000384531 106 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 MTCYBP4-201ENST00000401524 249 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 NDUFS5P1-201ENST00000405668 289 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 RPL5P18-201ENST00000406671 891 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AL583834.1-201ENST00000406943 343 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 RPL37P10-201ENST00000412884 288 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.45□□□□□ -1.7
COL6A2P12110 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.45□□□□□ -1.7
COL6A2P12110 ATP5HP2-201ENST00000433885 485 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 FABP5P14-201ENST00000437273 393 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AC009963.2-201ENST00000453431 138 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.45□□□□□ -1.7
COL6A2P12110 Y_RNA.631-201ENST00000459607 101 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.45□□□□□ -1.7
COL6A2P12110 TRBV1-201ENST00000476502 284 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 HIGD1AP13-201ENST00000509878 289 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.45□□□□□ -1.7
COL6A2P12110 AC006499.6-201ENST00000511169 607 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 RNU6-352P-201ENST00000516908 107 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.45□□□□□ -1.7
COL6A2P12110 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.45□□□□□ -1.7
COL6A2P12110 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.45□□□□□ -1.7
COL6A2P12110 CYP2C61P-201ENST00000604072 290 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AC084781.2-201ENST00000615568 161 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.45□□□□□ -1.7
COL6A2P12110 AC007546.2-201ENST00000623996 360 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AL359757.2-201ENST00000624309 274 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 MTND4LP32-201ENST00000636111 270 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 AC008013.2-202ENST00000637965 364 ntBASIC4.45□□□□□ -1.7
COL6A2P12110 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL6A2P12110 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL6A2P12110 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL6A2P12110 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL6A2P12110 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
COL6A2P12110 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.44□□□□□ -1.7
COL6A2P12110 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 NOL8P1-201ENST00000508336 3529 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.44□□□□□ -1.7
COL6A2P12110 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 MIR124-3-201ENST00000384866 87 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC004552.1-201ENST00000419089 348 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.44□□□□□ -1.7
COL6A2P12110 AF228730.2-201ENST00000438784 848 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.44□□□□□ -1.7
COL6A2P12110 RPS26P3-201ENST00000470205 348 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 AC090543.2-201ENST00000483963 348 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC004057.1-201ENST00000485827 348 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 RPL39P5-202ENST00000512505 151 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 RNU6-123P-201ENST00000516163 102 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.44□□□□□ -1.7
COL6A2P12110 IGLV3-26-201ENST00000520756 302 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC135001.1-201ENST00000544546 283 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC069240.1-201ENST00000548774 375 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC126177.3-201ENST00000551839 688 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 OR4H12P-201ENST00000556269 907 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.44□□□□□ -1.7
COL6A2P12110 AC104763.2-201ENST00000604179 382 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AL080274.1-201ENST00000605565 220 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC124303.1-201ENST00000605703 360 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC4.44□□□□□ -1.7
COL6A2P12110 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.44□□□□□ -1.7
COL6A2P12110 AC099669.2-201ENST00000616549 437 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AC087385.3-201ENST00000620477 187 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.44□□□□□ -1.7
COL6A2P12110 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.44□□□□□ -1.7
COL6A2P12110 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 AC090337.1-201ENST00000579651 2074 ntBASIC4.44□□□□□ -1.7
COL6A2P12110 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL6A2P12110 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.44□□□□□ -1.7
COL6A2P12110 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL6A2P12110 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL6A2P12110 AC021146.4-201ENST00000309229 279 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 Y_RNA.202-201ENST00000364083 110 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 RHOT1P2-201ENST00000366423 333 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 MIR606-201ENST00000384851 96 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL360182.1-201ENST00000397433 468 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 BX682237.1-201ENST00000415016 335 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL139396.1-201ENST00000421137 167 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AC092017.2-201ENST00000427600 362 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 FTH1P6-201ENST00000430768 320 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 RPS6P12-201ENST00000432491 726 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 AL591704.1-201ENST00000432574 275 ntBASIC4.43□□□□□ -1.7
COL6A2P12110 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.43□□□□□ -1.7
COL6A2P12110 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.43□□□□□ -1.7
COL6A2P12110 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.8 ms