Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AP000648.3-201ENST00000623539 4507 ntBASIC0.75□□□□□ -2.29
APOBP04114 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
APOBP04114 AC244636.1-201ENST00000421152 228 ntBASIC0.75□□□□□ -2.29
APOBP04114 AC004941.2-201ENST00000427009 228 ntBASIC0.75□□□□□ -2.29
APOBP04114 IPO7P1-201ENST00000442031 636 ntBASIC0.75□□□□□ -2.29
APOBP04114 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC0.75□□□□□ -2.29
APOBP04114 SEPT7P9-203ENST00000604116 343 ntBASIC0.75□□□□□ -2.29
APOBP04114 AC140725.3-201ENST00000616193 880 ntBASIC0.75□□□□□ -2.29
APOBP04114 MIR216A-201ENST00000385063 110 ntBASIC0.75□□□□□ -2.29
APOBP04114 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.75□□□□□ -2.29
APOBP04114 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC0.75□□□□□ -2.29
APOBP04114 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC0.75□□□□□ -2.29
APOBP04114 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC0.75□□□□□ -2.29
APOBP04114 NEFMP1-201ENST00000443423 1006 ntBASIC0.75□□□□□ -2.29
APOBP04114 AC239798.3-201ENST00000454459 408 ntBASIC0.75□□□□□ -2.29
APOBP04114 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
APOBP04114 AC011330.2-201ENST00000621680 635 ntBASIC0.75□□□□□ -2.29
APOBP04114 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC0.75□□□□□ -2.29
APOBP04114 PCF11-AS1-201ENST00000602322 1516 ntBASIC0.75□□□□□ -2.29
APOBP04114 RNA5SP257-201ENST00000363023 116 ntBASIC0.74□□□□□ -2.29
APOBP04114 MOB4-205ENST00000409916 829 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 SULT1C2P1-202ENST00000562418 459 ntBASIC0.74□□□□□ -2.29
APOBP04114 MIR2909-201ENST00000617113 69 ntBASIC0.74□□□□□ -2.29
APOBP04114 VTRNA1-3-201ENST00000365645 89 ntBASIC0.74□□□□□ -2.29
APOBP04114 SNORA18.2-201ENST00000383865 132 ntBASIC0.74□□□□□ -2.29
APOBP04114 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 AC007098.1-201ENST00000420122 367 ntBASIC0.74□□□□□ -2.29
APOBP04114 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC0.74□□□□□ -2.29
APOBP04114 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC0.74□□□□□ -2.29
APOBP04114 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 AC008127.2-201ENST00000549925 1075 ntBASIC0.74□□□□□ -2.29
APOBP04114 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 MIR5194-201ENST00000582634 120 ntBASIC0.74□□□□□ -2.29
APOBP04114 AC090425.2-201ENST00000608818 501 ntBASIC0.74□□□□□ -2.29
APOBP04114 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.74□□□□□ -2.29
APOBP04114 AC005534.2-201ENST00000431047 433 ntBASIC0.74□□□□□ -2.29
APOBP04114 PGBD4P3-201ENST00000440731 581 ntBASIC0.74□□□□□ -2.29
APOBP04114 AC135999.1-201ENST00000478962 479 ntBASIC0.74□□□□□ -2.29
APOBP04114 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC0.74□□□□□ -2.29
APOBP04114 DEFB108E-201ENST00000524692 240 ntBASIC0.74□□□□□ -2.29
APOBP04114 CR383656.8-201ENST00000549046 145 ntBASIC0.74□□□□□ -2.29
APOBP04114 AC097655.1-201ENST00000635075 318 ntBASIC0.74□□□□□ -2.29
APOBP04114 AC135776.4-201ENST00000624300 1904 ntBASIC0.74□□□□□ -2.29
APOBP04114 RNA5SP393-201ENST00000363423 117 ntBASIC0.74□□□□□ -2.29
APOBP04114 MIR124-3-201ENST00000384866 87 ntBASIC0.74□□□□□ -2.29
APOBP04114 AL357078.2-201ENST00000416486 427 ntBASIC0.74□□□□□ -2.29
APOBP04114 UBE2V1P13-201ENST00000436983 439 ntBASIC0.74□□□□□ -2.29
APOBP04114 RPS26P56-201ENST00000444468 240 ntBASIC0.74□□□□□ -2.29
APOBP04114 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC0.74□□□□□ -2.29
APOBP04114 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC0.74□□□□□ -2.29
APOBP04114 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC0.74□□□□□ -2.29
APOBP04114 SNRPFP3-201ENST00000457792 225 ntBASIC0.74□□□□□ -2.29
APOBP04114 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.74□□□□□ -2.29
APOBP04114 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC0.74□□□□□ -2.29
APOBP04114 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
APOBP04114 HMGB1P5-201ENST00000255320 642 ntBASIC0.73□□□□□ -2.29
APOBP04114 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
APOBP04114 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.73□□□□□ -2.29
APOBP04114 AL121871.1-201ENST00000443413 436 ntBASIC0.73□□□□□ -2.29
APOBP04114 OR6K5P-201ENST00000447050 945 ntBASIC0.73□□□□□ -2.29
APOBP04114 HAR1A.1-201ENST00000459583 118 ntBASIC0.73□□□□□ -2.29
APOBP04114 AC098583.1-201ENST00000480875 255 ntBASIC0.73□□□□□ -2.29
APOBP04114 RPL21P131-201ENST00000497298 483 ntBASIC0.73□□□□□ -2.29
APOBP04114 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC0.73□□□□□ -2.29
APOBP04114 AC118942.1-201ENST00000529674 1035 ntBASIC0.73□□□□□ -2.29
APOBP04114 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC0.73□□□□□ -2.29
APOBP04114 AC005156.1-201ENST00000613371 573 ntBASIC0.73□□□□□ -2.29
APOBP04114 RNU6-1334P-201ENST00000516032 105 ntBASIC0.73□□□□□ -2.29
APOBP04114 AC084757.1-201ENST00000559987 490 ntBASIC0.73□□□□□ -2.29
APOBP04114 AC007229.1-201ENST00000590455 412 ntBASIC0.73□□□□□ -2.29
APOBP04114 AC097468.3-201ENST00000607956 456 ntBASIC0.73□□□□□ -2.29
APOBP04114 Xist_exon1.1-201ENST00000618930 85 ntBASIC0.73□□□□□ -2.29
APOBP04114 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.73□□□□□ -2.29
APOBP04114 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.73□□□□□ -2.29
APOBP04114 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC0.73□□□□□ -2.29
APOBP04114 AC008427.1-201ENST00000503102 655 ntBASIC0.73□□□□□ -2.29
APOBP04114 AC093801.2-201ENST00000503966 1050 ntBASIC0.73□□□□□ -2.29
APOBP04114 RNU6-56P-201ENST00000516986 93 ntBASIC0.73□□□□□ -2.29
APOBP04114 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC0.73□□□□□ -2.29
APOBP04114 AL512605.2-201ENST00000592972 256 ntBASIC0.73□□□□□ -2.29
APOBP04114 uc_338.12-201ENST00000616344 181 ntBASIC0.73□□□□□ -2.29
APOBP04114 MIR4278-201ENST00000636094 69 ntBASIC0.73□□□□□ -2.29
APOBP04114 MFSD8-213ENST00000641134 1327 ntBASIC0.73□□□□□ -2.29
APOBP04114 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
APOBP04114 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
APOBP04114 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.72□□□□□ -2.29
APOBP04114 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
APOBP04114 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
APOBP04114 AC099336.2-201ENST00000422457 254 ntBASIC0.72□□□□□ -2.29
APOBP04114 IFNA20P-201ENST00000436840 528 ntBASIC0.72□□□□□ -2.29
APOBP04114 OR9N1P-202ENST00000494289 481 ntBASIC0.72□□□□□ -2.29
APOBP04114 AC116447.1-201ENST00000613153 453 ntBASIC0.72□□□□□ -2.29
APOBP04114 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.72□□□□□ -2.29
APOBP04114 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms