Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 OR56A5-201ENST00000340110 738 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-37P-201ENST00000362692 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 SNORA17.1-201ENST00000362945 126 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNA5SP326-201ENST00000363209 110 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNA5SP123-201ENST00000363244 119 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNY3P11-201ENST00000364153 102 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-11P-201ENST00000364234 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-7-201ENST00000364784 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 Y_RNA.350-201ENST00000365409 98 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-8-201ENST00000365467 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-25P-201ENST00000383873 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-1-201ENST00000383898 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-48P-201ENST00000384161 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-36P-201ENST00000384172 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-4P-201ENST00000384205 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-5P-201ENST00000384238 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-3P-201ENST00000384314 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-16P-201ENST00000384385 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-15P-201ENST00000384534 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-2-201ENST00000384627 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-29P-201ENST00000384637 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-9-201ENST00000384776 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-33P-201ENST00000384793 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 SAR1AP2-201ENST00000392696 594 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 MTCO3P19-201ENST00000415864 321 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 EI24P1-201ENST00000416584 867 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFAP04085 AC007098.1-201ENST00000420122 367 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RBMY1KP-201ENST00000423480 476 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC091390.3-201ENST00000426478 338 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFAP04085 OR2AQ1P-201ENST00000451972 200 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AZGP1P2-201ENST00000454506 345 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU7-169P-201ENST00000459456 61 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC009127.1-201ENST00000467090 155 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RPL7P5-201ENST00000471472 736 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFAP04085 SNORA40.15-201ENST00000516884 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 SCARNA16.4-201ENST00000516956 187 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RN7SKP147-201ENST00000517154 244 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDGFAP04085 AC023157.2-201ENST00000540596 141 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.98□□□□□ -1.61
PDGFAP04085 AC092490.3-201ENST00000545370 572 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.98□□□□□ -1.61
PDGFAP04085 MIR3934-201ENST00000579806 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 RNU6-6P-201ENST00000606623 107 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC004852.3-201ENST00000614131 326 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC103858.2-201ENST00000621471 543 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 AC233263.6-201ENST00000631132 1963 ntBASIC4.98□□□□□ -1.61
PDGFAP04085 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDGFAP04085 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PDGFAP04085 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 AL034549.2-201ENST00000618285 3373 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDGFAP04085 AL731532.2-201ENST00000623542 1953 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 RNU6-629P-201ENST00000384061 103 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 SNORA51.11-201ENST00000384442 131 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 Y_RNA.533-201ENST00000384596 114 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 MIR521-1-201ENST00000384902 87 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 MIR141-201ENST00000384975 95 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PDGFAP04085 EIF4EP2-201ENST00000422816 654 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 CRIP1P1-201ENST00000427567 185 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 AL356867.1-201ENST00000429623 299 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AC092573.2-201ENST00000434546 243 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 NDUFB1P2-201ENST00000449477 176 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 RPS29P33-201ENST00000456717 146 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 RNU6-1132P-201ENST00000459214 107 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 RNA5SP103-201ENST00000459503 118 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 RPS29P22-201ENST00000472363 168 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 OR51K1P-201ENST00000510214 950 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AL359273.1-201ENST00000510918 627 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AC004980.4-201ENST00000513375 203 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 SNORA25.11-201ENST00000515935 105 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 RNA5SP373-201ENST00000517271 95 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 AP004607.2-201ENST00000533949 322 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.97□□□□□ -1.61
PDGFAP04085 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.97□□□□□ -1.61
PDGFAP04085 SARNP-203ENST00000552080 726 ntTSL 2 BASIC4.97□□□□□ -1.61
PDGFAP04085 FKBP1BP1-201ENST00000553366 325 ntBASIC4.97□□□□□ -1.61
PDGFAP04085 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.97□□□□□ -1.61
PDGFAP04085 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.97□□□□□ -1.61
PDGFAP04085 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms