Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SUMO1P4-201ENST00000429430 302 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC068135.1-201ENST00000446164 246 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A1P02462 RPL21P39-201ENST00000463605 483 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC011979.1-201ENST00000472300 483 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 HMGN2P13-201ENST00000476476 274 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 RPL21P93-201ENST00000480465 489 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC233702.1-201ENST00000482905 502 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC093591.1-201ENST00000491435 481 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC010468.3-201ENST00000508225 458 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 RN7SKP234-201ENST00000517173 224 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC1.79□□□□□ -2.12
COL4A1P02462 AC008562.1-201ENST00000521763 330 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A1P02462 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.79□□□□□ -2.12
COL4A1P02462 AC022079.2-201ENST00000619739 566 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.79□□□□□ -2.12
COL4A1P02462 AL590396.2-201ENST00000636511 1041 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.79□□□□□ -2.12
COL4A1P02462 AL136520.1-201ENST00000600311 1322 ntBASIC1.79□□□□□ -2.12
COL4A1P02462 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A1P02462 RNU1-109P-201ENST00000383960 147 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 MIR607-201ENST00000385241 96 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 MIR320A-201ENST00000385302 82 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 PTGES3P2-201ENST00000407942 482 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 TATDN1P1-201ENST00000414123 891 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AL445183.3-201ENST00000414168 502 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AC007000.2-201ENST00000442564 487 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AC244505.5-201ENST00000443639 207 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A1P02462 AC104689.1-201ENST00000473356 768 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A1P02462 RPL21P131-201ENST00000497298 483 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A1P02462 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A1P02462 SNORA31.24-201ENST00000517232 57 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AP003049.1-201ENST00000529418 457 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 SETP2-201ENST00000553886 926 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 TRAV28-201ENST00000557548 323 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A1P02462 AC010928.2-201ENST00000588017 287 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.78□□□□□ -2.12
COL4A1P02462 AL671309.1-201ENST00000603750 544 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AC012493.3-201ENST00000604494 112 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 AP003122.6-201ENST00000623831 495 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 MIR6767-201ENST00000637302 66 ntBASIC1.78□□□□□ -2.12
COL4A1P02462 NF1-214ENST00000490416 1329 ntTSL 3 BASIC1.78□□□□□ -2.12
COL4A1P02462 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.78□□□□□ -2.13
COL4A1P02462 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL4A1P02462 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A1P02462 Y_RNA.327-201ENST00000365201 102 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MIR525-201ENST00000384978 85 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MIR517C-201ENST00000385103 95 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 SNORA67.6-201ENST00000391093 99 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 DNAJC19P6-201ENST00000401853 280 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MTATP6P31-201ENST00000406985 692 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 RNU4-27P-201ENST00000410889 139 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC109780.2-201ENST00000413467 845 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A1P02462 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A1P02462 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A1P02462 HMGB1P45-201ENST00000435986 653 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC097499.1-201ENST00000444277 208 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AL121594.1-201ENST00000475906 575 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC004223.1-201ENST00000479840 271 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC096571.1-202ENST00000506634 735 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 RAC1P5-201ENST00000512182 576 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A1P02462 MIR3199-1-201ENST00000582434 88 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MIR3660-201ENST00000584845 100 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 ZNF92P2-201ENST00000600543 1059 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC091057.2-201ENST00000602594 792 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MIR6504-201ENST00000613520 61 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL4A1P02462 FO624990.1-201ENST00000636373 85 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 NUP58P1-201ENST00000502546 1738 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AL049737.1-201ENST00000413920 1403 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A1P02462 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
COL4A1P02462 RNU6-543P-201ENST00000362576 108 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 RNA5SP391-201ENST00000363456 119 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 SNORA51.2-201ENST00000364595 132 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AL035405.1-201ENST00000400795 710 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC073264.1-201ENST00000411508 416 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 FO393414.1-201ENST00000428697 1184 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC023347.2-201ENST00000433994 462 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A1P02462 MTND4P15-201ENST00000437913 1033 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.77□□□□□ -2.13
COL4A1P02462 snoU13.7-201ENST00000459220 104 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 RN7SL274P-201ENST00000492268 272 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 MTCYBP18-201ENST00000501056 747 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.77□□□□□ -2.13
COL4A1P02462 AC025768.1-201ENST00000510057 267 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 RNA5SP102-201ENST00000516865 106 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 RN7SKP40-201ENST00000517211 242 ntBASIC1.77□□□□□ -2.13
COL4A1P02462 CASP1-212ENST00000531166 300 ntTSL 5 BASIC1.77□□□□□ -2.13
COL4A1P02462 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
COL4A1P02462 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms